Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00013 ATGGGATCTAGTGGTAGCAAAGGCACTTCCTCTTGCAGTTCGTCGTCATCTTCCGGCAGTTTCCGGAAGGTTCGATCTAAGAAAGGACATAGAGGATTTCAGTCGTATTGTCTGGGAACAACCTCTGGATCTCATGACGCACAGAATAAAACAAATGGCAATGGTGTTACATACAACTGTTACACTGGGACGCGCTCAAATGAGATGAAATCAAAGTCTTTTAGAGATGATAAAAGGAAAACATCTGATGACATGCCTTGCATGCCTTCCAACATTGACCTTAGTGAGTGGGATCAAACAAGCATCTCCAGTAATTCCTCCAGAACTCGTAGCCGATCTACACGTGCTTCTTCAACTGGTGGTCGATTCCTTTCTCGGTTTAGCCTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACAACCAGTTTAGGGTCATCAAGGTCCTGCCATGCTTCTTCTACAACTATGTCAATATTCAATAATGAAGATGATCGGAGTCTGCATCCAGGACCCACTGGCAGCTTGGTTAATAGAAATGAAACTCGACAATATTCATCTGGCAACTTGCAGGGTAATCCCTCATCTTCTTCTAGACAGAATGCGGTTAGAGATGGAAATGGTTCATGTGAAGGGCTGGATCTAAACTTGTTTTCTTCAAGAATTCATGCTGAGACTGAAAATATTGAGGGTCGACAAAATGGAGCTCGAGAACCTGTGGAACGGAATTTTCGGTACAGCCGGACTCTAAGTGTTGGGAGGCTTCGTAATAGAGTTCTTCGCCAATCAGCTTTCTCTGATGTCAGCTTTTGCCCCCGGCAACAAGAGAGAGAAGCAAGGGATACTAGGGAGGATAATGAAAGACAAGCGGGGGAGGGAGATTCAAGAGTATTACCATCTTTTAGTAATGCTATAAATTCTTCTTCTATGTCTGGTTATCCTCCATCCAGTATTTCTAACTCCTTATTCAACATCCAAGACTATGAGGTTGAGAATTCGCGGTCAAGAGAAACTAGGTACCAAGATCTGCTGGAACACAGATCCAACTTCCTTGAACGGAGAAGAAGAATAAGATCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTATCTGGACATGACAGATCTTGTATCTTGTCTGGTCAACATAGAAATGGTCATTGTACATGCCGAATTGGTAGTCGTGATACTAGTTCAATTGATGATACCGGTACTAGAGCTAGCATATCAAGAATTGTAATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGCGGTTTTATCTTCCCGCCCTTCTGTGTCTTCCATTGGATCTGTTCCTGCGCCTAATGATGTTGTGGAGTCTTTGCCGGTCAAAACATACACAAAGTTGCATAAACATCAAGAGGATGCTGCCCAATGCTACATATGCCTGGTGGAGTATGAGGATGGAGACAGCATCCGTGAGCTGCCTTGCCATCACCAATTTCATAGAACATGCATAGACAAGTGGCTTAAGGAAATTCACAGGGTATGTCCACTATGTCGGAGGGACATCTGCATATCTGATTCACTGTCAATGGAGAACTAA 1599 0.4365 MGSSGSKGTSSCSSSSSSGSFRKVRSKKGHRGFQSYCLGTTSGSHDAQNKTNGNGVTYNCYTGTRSNEMKSKSFRDDKRKTSDDMPCMPSNIDLSEWDQTSISSNSSRTRSRSTRASSTGGRFLSRFSLIPGNISFRLSRTTSLGSSRSCHASSTTMSIFNNEDDRSLHPGPTGSLVNRNETRQYSSGNLQGNPSSSSRQNAVRDGNGSCEGLDLNLFSSRIHAETENIEGRQNGAREPVERNFRYSRTLSVGRLRNRVLRQSAFSDVSFCPRQQEREARDTREDNERQAGEGDSRVLPSFSNAINSSSMSGYPPSSISNSLFNIQDYEVENSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRIGSRDTSSIDDTGTRASISRIVMLAEALFEVLDEIHQQSAVLSSRPSVSSIGSVPAPNDVVESLPVKTYTKLHKHQEDAAQCYICLVEYEDGDSIRELPCHHQFHRTCIDKWLKEIHRVCPLCRRDICISDSLSMEN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00013 532 MobiDBLite consensus disorder prediction 271 300 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 144 206 - -
Pral2426g00013 532 Pfam Ring finger domain 476 519 IPR001841 -
Pral2426g00013 532 ProSiteProfiles Zinc finger RING-type profile. 477 519 IPR001841 -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 1 22 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 69 120 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 1 29 - -
Pral2426g00013 532 SUPERFAMILY RING/U-box 455 525 - -
Pral2426g00013 532 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 440 524 IPR013083 -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 273 292 - -
Pral2426g00013 532 FunFam Putative RING zinc finger domain superfamily protein 446 524 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 144 163 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 69 84 - -
Pral2426g00013 532 SMART ring_2 477 518 IPR001841 -
Pral2426g00013 532 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 531 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 173 205 - -
Pral2426g00013 532 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00013 Pral-Chr2426 98804 104047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00013 72 526 C3H Transcription Factor Family AT5G45290 50.318 4.33e-116 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00013 - - gmx:100815830 657.136