Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00012 ATGAATAGCATCAACGACGACAATTCCAGACAAGATCTCGACCCTCAAAGTGACCACAGTTCTGACTATTTAGCTCACTCTCTTCCTCTCCAGACTCAGACTCAGCCTCAGCCTCGCCGCCCTCGTGGCTTTGCCGCCACGGCGGCGGCTACCACTGCCCCTAATTCCGCTGGAAAGGGAAAGAAAGAGAGAGAAAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTCGCCGGCCTCCGTCAGTATGGTAATTTCCCTCTCCCGGCTCGTGCTGACATGAATGATGTGCTTGCTGCGCTTGCCCGCGAGGCTGGTTGGGTTGTTGAGGCAGATGGCACCACCTACCGTCAGTGCCAGCCTTCTTCGCAAATGGCATCATTTGCTGCAAGGTCAGTTGAAACCCCACTCTCTGCAGGGTCTTTAAGAGCTTGCACTGCTCGAGAAACACTAGAGAATCAACCCCCAACACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATCCAAGTGCAAGCCCTATCAATCCGGTTGACTGCTTGGAGGCTGATCAGCTTATGCAGGATATTCATTCTGGGGTGCATGAGAATGATTTCATGGGCACACCTTATGTTCCTGTTTATGTGAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGACGGGAGCTAATTCACATAAAGTCTTTAAATTTTGATGGTGTCATTGTGGACTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTGACATTGTTAGAGAAATCAAGTTGAAGTTGCAGGTTGTTATGGCTTTTCATGAGTATGGAGGGAATGATTCCAGTGATCCATTGATTGCCCTCCCACAATGGATTTTGGACATTGGAAAAGACAACCGGGATATTTTTTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACGGAGTTTAATGACTTGTTTGTGGAAGGCCTCATTTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCGTTTTCAGTAAAGATGGGATGGAGGTATCCTGGTATTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGCAGAGCAGCCAAATTACGTGGCCACTCTTTTTGGGCGAGAGGACCTGATAATGCTGGACAATACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGGGGTGATTATGACAATTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGATCATGCAGATAATGTTTTGTCCCTTGCGAGCCTCGCTTTTGAGGAAACAAGACTAATTGTCAAGGTTCCTACTGTATACTGGTGGTACAAGACTGCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACGAACCAGGATGGATACTCTCCTGTTTTTGAGGTTCTGAAAAAACATGGTGTGACGATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCTGACGAGTCGTTGGCTGACCCAGAAGGCTTAACTTGGCAGGTATTGAGCTCATCCTGGGATCGGGGGTTGATAGTAGCTGGAGAGAATGCACTACCATGTTATGAGAGAGAAGGGTTCAAAAGACTAGTTGATATAGCGAAGCCAAGAAATGATCCTGATCGCCACCACTTTTCATTTTTTGCATACCAGCAACCTTCCATGGTTCAGGGGAATATTTGCTTACAGGAGTTGGATCACTTCATCAAATGCATGCATGGTAAGTTTTATGACAATGCATTCTGA 1989 0.4555 MNSINDDNSRQDLDPQSDHSSDYLAHSLPLQTQTQPQPRRPRGFAATAAATTAPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCQPSSQMASFAARSVETPLSAGSLRACTARETLENQPPTLRIDESLSPASIDSVVIAERDSKNEKYPSASPINPVDCLEADQLMQDIHSGVHENDFMGTPYVPVYVKLPAGIINKFCQLIDPEGIRRELIHIKSLNFDGVIVDCWWGIVEGWSPQKYVWSGYRELFDIVREIKLKLQVVMAFHEYGGNDSSDPLIALPQWILDIGKDNRDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFNDLFVEGLISAVEIGLGASGELKYPSFSVKMGWRYPGIGEFQCYDKYLLQSLRRAAKLRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETRLIVKVPTVYWWYKTASHAAELTAGYHNPTNQDGYSPVFEVLKKHGVTMKFVCLGFQLSSQEADESLADPEGLTWQVLSSSWDRGLIVAGENALPCYEREGFKRLVDIAKPRNDPDRHHFSFFAYQQPSMVQGNICLQELDHFIKCMHGKFYDNAF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00012 662 SUPERFAMILY (Trans)glycosidases 223 659 IPR017853 -
Pral2426g00012 662 Pfam Glycosyl hydrolase family 14 248 633 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 284 302 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 564 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 421 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 263 277 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 601 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 522 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 472 491 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 523 534 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 306 327 IPR001554 GO:0000272|GO:0016161
Pral2426g00012 662 MobiDBLite consensus disorder prediction 1 75 - -
Pral2426g00012 662 MobiDBLite consensus disorder prediction 58 75 - -
Pral2426g00012 662 MobiDBLite consensus disorder prediction 20 40 - -
Pral2426g00012 662 Gene3D Glycosidases 219 661 - -
Pral2426g00012 662 Pfam BES1/BZR1 plant transcription factor, N-terminal 58 204 IPR008540 -
Pral2426g00012 662 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 166 655 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00012 Pral-Chr2426 91026 97141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00012 12 662 Glycoside Hydrolase AT5G45300 64.897 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pral2426g00012 Glyco_hydro_14 3.1e-84 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00012 K01177 - gmx:100777004 1125.92