Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00011 ATGAATAGCATCAACGACGACAATTCCAGACAAGATCTCGACCCTCAAAGTGACCACAGTTCTGACTATTTAGCTCACTCTCTTCCTCTCCAGACTCAGACTCAGCCTCAGCCTCGCCGCCCTCGTGGCTTTGCCGCCACGGCGGCGGCTACCACTGCCCCTAATTCCGCTGGAAAGGGAAAGAAAGAGAGAGAAAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTCGCCGGCCTCCGTCAGTATGGTAATTTCCCTCTCCCGGCTCGTGCTGACATGAATGATGTGCTTGCTGCGCTTGCCCGCGAGGCTGGTTGGGTTGTTGAGGCAGATGGCACCACCTACCGTCAGTGCCAGCCTTCTTCGCAAATGGCATCATTTGCTGCAAGGTCAGTTGAAACCCCACTCTCTGCAGGGTCTTTAAGAGCTTGCACTGCTCGAGAAACACTAGAGAATCAACCCCCAACACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATCCAAGTGCAAGCCCTATCAATCCGGTTGACTGCTTGGAGGCTGATCAGCTTATGCAGGATATTCATTCTGGGGTGCATGAGAATGATTTCATGGGCACACCTTATGTTCCTGTTTATGTGAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGACGGGAGCTAATTCACATAAAGTCTTTAAATTTTGATGGTGTCATTGTGGACTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGAACTTTTTGACATTGTTAGAGAAATCAAGTTGAAGTTGCAGGTTGTTATGGCTTTTCATGAGTATGGAGGGAATGATTCCAGTGATCCATTGATTGCCCTCCCACAATGGATTTTGGACATTGGAAAAGACAACCGGGATATTTTTTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACGGAGTTTAATGACTTGTTTGTGGAAGGCCTCATTTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCGTTTTCAGTAAAGATGGGATGGAGGTATCCTGGTATTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGCAGAGCAGCCAAATTACGTGGCCACTCTTTTTGGGCGAGAGGACCTGATAATGCTGGACAATACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGGGGTGATTATGACAATTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGATCATGCAGATAATGTTTTGTCCCTTGCGAGCCTCGCTTTTGAGGAAACAAGACTAATTGTCAAGGTTCCTACTGTATACTGGTGGTACAAGACTGCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACGAACCAGGATGGATACTCTCCTGTTTTTGAGGTTCTGAAAAAACATGGTGTGACGATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCTGACGAGTCGTTGGCTGACCCAGAAGGCTTAACTTGGCAGGTATTGAGCTCATCCTGGGATCGGGGGTTGATAGTAGCTGGAGAGAATGCACTACCATGTTATGAGAGAGAAGGGTTCAAAAGACTAGTTGATATAGCGAAGCCAAGAAATGATCCTGATCGCCACCACTTTTCATTTTTTGCATACCAGCAACCTTCCATGGTTCAGGGGAATATTTGCTTACAGGAGTTGGATCACTTCATCAAATGCATGCATGGTGACATTACGGGGGACCTGTAA 1986 0.4582 MNSINDDNSRQDLDPQSDHSSDYLAHSLPLQTQTQPQPRRPRGFAATAAATTAPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCQPSSQMASFAARSVETPLSAGSLRACTARETLENQPPTLRIDESLSPASIDSVVIAERDSKNEKYPSASPINPVDCLEADQLMQDIHSGVHENDFMGTPYVPVYVKLPAGIINKFCQLIDPEGIRRELIHIKSLNFDGVIVDCWWGIVEGWSPQKYVWSGYRELFDIVREIKLKLQVVMAFHEYGGNDSSDPLIALPQWILDIGKDNRDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFNDLFVEGLISAVEIGLGASGELKYPSFSVKMGWRYPGIGEFQCYDKYLLQSLRRAAKLRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETRLIVKVPTVYWWYKTASHAAELTAGYHNPTNQDGYSPVFEVLKKHGVTMKFVCLGFQLSSQEADESLADPEGLTWQVLSSSWDRGLIVAGENALPCYEREGFKRLVDIAKPRNDPDRHHFSFFAYQQPSMVQGNICLQELDHFIKCMHGDITGDL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00011 661 Gene3D Glycosidases 219 659 - -
Pral2426g00011 661 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 166 655 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 MobiDBLite consensus disorder prediction 1 75 - -
Pral2426g00011 661 MobiDBLite consensus disorder prediction 58 75 - -
Pral2426g00011 661 MobiDBLite consensus disorder prediction 20 40 - -
Pral2426g00011 661 Pfam BES1/BZR1 plant transcription factor, N-terminal 58 204 IPR008540 -
Pral2426g00011 661 Pfam Glycosyl hydrolase family 14 248 633 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 SUPERFAMILY (Trans)glycosidases 223 657 IPR017853 -
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 564 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 263 277 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 306 327 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 421 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 522 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 523 534 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 472 491 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 601 IPR001554 GO:0000272|GO:0016161
Pral2426g00011 661 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 284 302 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00011 Pral-Chr2426 90044 97141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00011 12 657 Glycoside Hydrolase AT5G45300 65.379 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pral2426g00011 Glyco_hydro_14 3.1e-84 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00011 K01177 - gmx:100777004 1127.08