Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2422g00006 ATGGTTTCGTTCAGGTTTCACCAGTACCAGGTGGTGGGAAGAGCCCTTCCCACAGAGGCAGATGAGCACCCAAAGATCTACCGTATGAAGCTTTGGGCCACCAATGAGGTCCGTGCCAAATCCAAGTTCTGGTATTTCCTGAGAAAGCTGAAGAAGGTGAAGAAAAGCAATGGGCAAGTGCTAGCCATTAACGAGATTTATGAGAAAAACCCTACCAAGATCGATAACTATGGAATTTGGCTGCGATATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAATACCGAGACACCACCCTCAATGGCGCTGTTGAACAAATGTACACGGAAATGGCATCACGTCACCGGGTGAGGTTTCCATGCATCCAGATCATCAAGACAGCCACCATCCCTGCAAAGATGTGCAAAAGAGAGAGCACCAAGCAGTTTCACAATTCTAAAATCAAGTTCCCATTGGTGTTCAAGAAGGTCAGGCCGCCAAGTAGGAAGCTGAAGACGACTTACAAGGCATCAAGGCCCAACTTGTTCATGTGA 537 0.473 MVSFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIYEKNPTKIDNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKMCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2422g00006 178 FunFam 60S ribosomal protein L18a 72 147 - -
Pral2422g00006 178 Gene3D - 71 144 - -
Pral2422g00006 178 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 128 IPR023573 GO:0003735|GO:0005840|GO:0006412
Pral2422g00006 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 4 177 IPR028877 -
Pral2422g00006 178 SUPERFAMILY RplX-like 71 146 - -
Pral2422g00006 178 Gene3D - 1 70 - -
Pral2422g00006 178 Hamap 50S ribosomal protein L18Ae [rpl18a]. 6 69 IPR028877 -
Pral2422g00006 178 FunFam 60S ribosomal protein L18a 1 71 - -
Pral2422g00006 178 PIRSF Ribosomal_L18a 1 178 IPR021138 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2422g00006 Pral-Chr2422 60949 63460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2422g00006 1 178 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 92.135 3.77e-125 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2422g00006 K02882 - cave:132172644 360.918