Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2422g00001 ATGAAGGAGAGGCAACGTTGGACAGCTGAAGAGGATGCTTTATTACGTGCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAACCCCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATCAAGAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTCGTCATCCGCCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCTGGTCGCACTGCTAAGAGATTAGGTAAGTGGTGGGAAGTATTCAAAGAGAAGCAGCAGAGAGAAAAAAAAGAGATCAACAAAACGGTTGACCCAATTGACGACACCAAATACGATCATATACTGGAGACTTTTGCAGAAAAGCTTGTGAAAGAACGCCCTTCCCCATCCTACCTCATGGCTGCCTCAAGCGGGGCCTTAATTCTTACTGATGCAACTGCTCCTCCATCAGCTATGCTTCCTTCTTGGCTTTCAAACTCTAACAGCACTTTAACTATTAGGCCACCTTCCCCTTCTGTAACGCTAAGTCTCTCTCCCTCACCTGTGGCTGCTCCACCTCCAGTTCGATGGCTACAACCTGAGAAAATGCCAGAGAATACTTCTGCTGTTATTGGGAATGTAAAACCTCATGGAACTATTCCATGTTTTGGTGATAACATGCTTGTATCTGAGTTAGTTGGATGCTGCAAAGAATTGGAAGAAGGGCACCGGGCATGGTCAATGCATAGGAAGGAAACAGCATGGAGGTTAAGGCGGGTGGAGCTGCAGTTGGAGTCAGAGAAGGCATGTCGTATGCGGCAGAAGATGGAAGAGTTTGAAGCAAAGATTAAATCTCTTCGGGAAGAACAGATGGCTGCTTTGGATAGAATGGAAGCTGAATACCGGGAGCAGCTAGATGAACTGAGAAGAGATGCAGAAACCAAGGAGAAGAAATTAGCTGAGCAACTGGCTGCAAAGCACTCAAGGCTTAGTAAGTTTCTGGAGCAGATAGGTTGCGGACCCAAGCTTGCTGAGTCAAATGTAAGATGA 1074 0.4609 MKERQRWTAEEDALLRAYVKQYGPREWNLVSQRMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEKSLVIRLQQIYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASSGALILTDATAPPSAMLPSWLSNSNSTLTIRPPSPSVTLSLSPSPVAAPPPVRWLQPEKMPENTSAVIGNVKPHGTIPCFGDNMLVSELVGCCKELEEGHRAWSMHRKETAWRLRRVELQLESEKACRMRQKMEEFEAKIKSLREEQMAALDRMEAEYREQLDELRRDAETKEKKLAEQLAAKHSRLSKFLEQIGCGPKLAESNVR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2422g00001 357 FunFam MYB-related transcription factor 4 58 - -
Pral2422g00001 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 353 - -
Pral2422g00001 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pral2422g00001 357 Gene3D - 62 120 - -
Pral2422g00001 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Pral2422g00001 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Pral2422g00001 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pral2422g00001 357 CDD SANT 6 53 IPR001005 -
Pral2422g00001 357 Gene3D - 4 58 - -
Pral2422g00001 357 Pfam Myb-like DNA-binding domain 7 69 - -
Pral2422g00001 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Pral2422g00001 357 CDD SANT 63 104 IPR001005 -
Pral2422g00001 357 Coils Coil 284 333 - -
Pral2422g00001 357 SMART sant 3 55 IPR001005 -
Pral2422g00001 357 SMART sant 58 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2422g00001 Pral-Chr2422 10863 14257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2422g00001 1 347 MYB Transcription Factor Family AT2G37630 63.636 2.97e-153 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2422g00001 Myb_DNA-bind_6 8.2e-16 CL0123