Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2419g00004 ATGGAGCACAGGACTTGCTCTGTTCTTGGGAGCTTGCAAGTCCATGCGTTAGAAGCAGTATTTTTGTTGTTGGTGATATTCCAGCTATCAATGTTCCTTGTGAAACAAGGGAATAGTCTGAACCAGCGTGTGCCTAATTATAAAACTGTTCCATTCCATCTCTTTGACCATGGCAGGATGGTTGAGTTCCCGTCCATCCCTGCTCTTGAAGGAGTAAGTCTTCGCGTCTATGACAGAGACTATAAATCCCACATCTTACACACAGAGGATCCAGAAGGTTGTCTTCCCAAACTCTTTCTACAACATCGTCTCTACAATTCATCCATTTATCCTTTAGAGTTTTATGATATGACCAAAGAAAATGTTACTTTCTTCAATTGTTCTTCACTTGGGTCGAGATACCTTAGACACGAACACCTTTCCAATTCATCTGCACAAGATATGGTTGTCTGCCCAATTTATGCTATTTCCTCCGAAGATAGTATCCTGGAGTGGGACCTTGCTTTCTGCACCAAGATGTTTCAGGTAGTTTCTCCGATTTCCGCAATGTGCCTTCAAAGAAATGTCTTGCAAATCAAATTTCCACAACCAAATTCTGATATTGAAAAGGGCAAAACCAGGAAGATTCTTGGAATTGTTTTCCCAGGTTCAATTCTATTGGCGTTGGTGTTCATTGCGTGCTTTTACATATATCTCTATTTCAAAGAAAAAGGAGATGATCAAGTGAGATTGGAAAAGTTTTTGGAGGATTACAAGGTACATAAACCTACTAGATTTTCTTATGCTGACCTGAAAAGAATCACAAATCATTTCAAGTATAAATTAGGTGAAGGAGCTCATGGAGAAGTGTTTAAAGGTAAGTTATCTACCGAAATCCAAGTGGCAGTGAAAGTAATCAATAATTCAGATAGCGATGGGCAAGAGGTCATCAATGAAGTGGGGACTATGGGCAAAATTCATCACATCAATGTTGTTCGTTTGCTAGGCTTTTGTGCTGATGGTTTTCATCGTGCTCTTGTTTATGACTTCTTTCCAAATGGTTCCCTTCAGAAGTTCATAACTTCGCCAGACAACAAGGAAAATTTCCTTGGATGGTTGAAATTGCAACAATTAGCCCTTTCCATAGCTCAAGGGATTGAATATCTTCATCAAGGTTGTGATTACCGAATTCTTCACTTTGACATCAATCCTCGTAATGTGCTGTTAGATCACAATTTTACTCCAAAAATTTCTGATTTTGGCCTAGCTAAATTGTGTTCTAAAAATCAAAGTACAATATCAATAACAGCAGGTAAAGGAACTTTGGGTTATATTGCCCCTGAAATATTCTCTCGAAACTTTGGAAAGGTGTCATATAAAGCAGATATTTACAGTTATGGAATACTGCTACTAGAAATGGTTGGTGGAAGGAAAAATGTTGACACTAATCCAGAAACCTTACAAGTGTTATACCCAGATTGGATCCATAGTTTGATGGAAGGAGGTGATATAAGTATCCATATGGAAGATGAAGATGACATTAAGATTGCGAGAAAACTAGCAATTGTGGGACTTTGGTGCATTCAATGGCATCCAGCAAATCGTCCTTCCATGAAGACCATTATTCAAATGCTAGACGGAGAGGTTGATAAATTAAAGGTGCCTCCTACTCCATTTGACTTTGCCACTTCAACTAATATGAGTACCATTATTCCTACGAGACATTTGAATTTAGAGTTAGAAGTGGTTCATGAATTCGAATAA 1743 0.3838 MEHRTCSVLGSLQVHALEAVFLLLVIFQLSMFLVKQGNSLNQRVPNYKTVPFHLFDHGRMVEFPSIPALEGVSLRVYDRDYKSHILHTEDPEGCLPKLFLQHRLYNSSIYPLEFYDMTKENVTFFNCSSLGSRYLRHEHLSNSSAQDMVVCPIYAISSEDSILEWDLAFCTKMFQVVSPISAMCLQRNVLQIKFPQPNSDIEKGKTRKILGIVFPGSILLALVFIACFYIYLYFKEKGDDQVRLEKFLEDYKVHKPTRFSYADLKRITNHFKYKLGEGAHGEVFKGKLSTEIQVAVKVINNSDSDGQEVINEVGTMGKIHHINVVRLLGFCADGFHRALVYDFFPNGSLQKFITSPDNKENFLGWLKLQQLALSIAQGIEYLHQGCDYRILHFDINPRNVLLDHNFTPKISDFGLAKLCSKNQSTISITAGKGTLGYIAPEIFSRNFGKVSYKADIYSYGILLLEMVGGRKNVDTNPETLQVLYPDWIHSLMEGGDISIHMEDEDDIKIARKLAIVGLWCIQWHPANRPSMKTIIQMLDGEVDKLKVPPTPFDFATSTNMSTIIPTRHLNLELEVVHEFE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2419g00004 580 ProSiteProfiles Protein kinase domain profile. 269 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2419g00004 580 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Pral2419g00004 580 Gene3D Transferase(Phosphotransferase) domain 1 344 547 - -
Pral2419g00004 580 Gene3D Phosphorylase Kinase; domain 1 243 343 - -
Pral2419g00004 580 PANTHER RUST RESISTANCE KINASE LR10-RELATED 243 557 IPR045874 GO:0004672
Pral2419g00004 580 SUPERFAMILY Protein kinase-like (PK-like) 252 538 IPR011009 -
Pral2419g00004 580 FunFam serine/threonine-protein kinase PBS1-like 238 343 - -
Pral2419g00004 580 FunFam PR5-like receptor kinase 344 549 - -
Pral2419g00004 580 Pfam Protein kinase domain 272 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2419g00004 Pral-Chr2419 35647 38862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2419g00004 259 551 Receptor kinase-like Gene Family AT1G66910 47.000 9.04e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral2419g00004 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2419g00004 - - tpra:123893290 634.795