Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2419g00002 ATGATTTACTATCACAGATTTTTGTTGTTGGTGTTGCTTCTGAAACTGGGGAATGGTCAGAACCAGCATTTGCCTGATGATGAAATTGTTCCATTTCATCTCAAGGGGACGATGGTTGAGTTCCCGTCTATTCCTGCTCTAAAACGAGAAACCTTCGCCGTCAATAACATATACAACGAATCCCACTTCCTACACATGTCCTTACGTGATCCAAAACGTTGTCTTCCCAGACTCTTTCTAGAACGTCGTCTCTACAATTCATCCAATATTGGTCCTTTGGAGTATGATAATTTTAACGTGACCGAAAATGTTACTTTCTTCAACTGTTCTTCAATTGGTTCGAGACGCCTCAGAAACATAAATATGGAACAAGATATGATTGTCTGCCCCATTTTTGCTGCTTCCTCCGAAGATAGTGTCCTGGAGTGGGACCTAGCTTCTTGCACGATGATGTTTCAGCTAGCTTCGCCAATACGAGCAGATCAGCTTCGGGCGAACTACTTGCCACTCAGGTTGCCTCAGACAAAATCTGACATTGAAAAGCACAAAACTAGCATGATTCTTATAATTGTTTTACCAGGGTCATTTGTACTGGTGGTGTTGTTCATTGTAAGCCTTTACATATATCGCCACTTCAAGAAGAGGGGGGAAGATCAAGTAAGATTGGAAAAGTTTTTGGAAGATTACAAGGCAATGAAGCCTACTAGATTCTCTTATGCTGATCTCAAAAGAATTACAAACCATTTCAAGGATAAAGTAGGTGAAGGAGCTCATGGAACTGTCTTTAAAGGCTTTTGTGCTGATGGTTTTCACCGTGCTCTTGTATATGAGTTTTTCCCTAACGGTTCACTTCAGAAGTTCATATCTTCCCCTGACGACAAAGAAAATTTCATTGGATGGCTAAAGTTACAACAACTAGCCCTTGGCATAGCAAGAGGGATTGAGTACCTTCACCAAGGTTGTGATTATCGAATTCTTCACTTTGACATCAATCCTCATAATGTGTTATTAGATCATAATTTCATTCCTAAAATTTCTGATTTTGGTTTAGCCAAATTATGTTCTAAAAATCAAAGTACAGTGTCAATGACGGCAGCTAGAGGAACTTTAGGCTATATTGCACCTGAAGTTTACTCTCGAAACTTTGGGAATGTATCATATAAATCAGATGTTTATAGTTATGGAATGTTGCTGCTAGAGATGGTTGGGGGAAGAAAAAATGTTGACACAAATCAAGACACTTTTCAAGTTCTATACCCAGAATGGATTCATAATTTGATTGAAGGAGGAGATATAAATATCTATATGGAGGAAGATGATGATATTAGAATTGTAAAGAAACTAGCAACTGTGGGGCTTTGGTGTATTCAGTGGCATCCAATAAACCGGCCATCCATGAAAATGGTGATACAGATGTTGGAAGGAGAAGTAGATAAATTAAAGGTGCCTCCTACTCCATTTGGCACTGCTACTTCAATCAATACAAGAACCATTATTCCTGCAAGACATCTGAACTCTGAGTTGGAAGCGGTTCATGAATTAGAATAA 1548 0.3895 MIYYHRFLLLVLLLKLGNGQNQHLPDDEIVPFHLKGTMVEFPSIPALKRETFAVNNIYNESHFLHMSLRDPKRCLPRLFLERRLYNSSNIGPLEYDNFNVTENVTFFNCSSIGSRRLRNINMEQDMIVCPIFAASSEDSVLEWDLASCTMMFQLASPIRADQLRANYLPLRLPQTKSDIEKHKTSMILIIVLPGSFVLVVLFIVSLYIYRHFKKRGEDQVRLEKFLEDYKAMKPTRFSYADLKRITNHFKDKVGEGAHGTVFKGFCADGFHRALVYEFFPNGSLQKFISSPDDKENFIGWLKLQQLALGIARGIEYLHQGCDYRILHFDINPHNVLLDHNFIPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVYSRNFGNVSYKSDVYSYGMLLLEMVGGRKNVDTNQDTFQVLYPEWIHNLIEGGDINIYMEEDDDIRIVKKLATVGLWCIQWHPINRPSMKMVIQMLEGEVDKLKVPPTPFGTATSINTRTIIPARHLNSELEAVHELE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2419g00002 515 PANTHER RUST RESISTANCE KINASE LR10-RELATED 264 492 IPR045874 GO:0004672
Pral2419g00002 515 Pfam Protein kinase domain 262 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2419g00002 515 Gene3D Phosphorylase Kinase; domain 1 221 275 - -
Pral2419g00002 515 ProSiteProfiles Protein kinase domain profile. 185 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2419g00002 515 Gene3D Transferase(Phosphotransferase) domain 1 279 482 - -
Pral2419g00002 515 FunFam PR5-like receptor kinase 279 484 - -
Pral2419g00002 515 SUPERFAMILY Protein kinase-like (PK-like) 230 474 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2419g00002 Pral-Chr2419 19469 21471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2419g00002 197 514 Receptor kinase-like Gene Family AT1G66910 39.623 1.24e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral2419g00002 Pkinase 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2419g00002 - - tpra:123893308 526.939