Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2419g00001 ATGGCACATCAACAGCCCCAGACTAATCCGGATCGAGACATGACAGGAATCATCAAGGTTGGCGTGCCTCTAGCCCCTAAGATGCTGCATTCTCACGTCTCGAACACAAGACCTGCGCGAGGAGCATCACTTTCTTTCTCATTTGCCTTCCGCAAAATTCCCTTTGCAGCATTTCTCTCTGGCATTCTTGCAGTTGCAGCGGATGTGTATTCGACGATTTACTTTGATTCTGGGGGTAAATATGATGGCGATTTGATTTCAACACCAGTTGCATTTGCCTTAGGAAAAATCACAGGAAGATATGTTTTGCCATGCACTCTTCTAAGATTTATAGTTGGTATATTACTTCTGTTCATCTTGTTAATTTACACATATCGGAGAAGACACTTATCAGGCTATGAAAGCATTGAAGATTTCATACGACTTTATGACCTTCATCCAATAAGGTACTCCTACAAGGAATTAAAGTCAGTGACCAAAGGTTTCAACAAGAAGATTGGTGAAGGAGGCTTCGGCACTGTGTACAAAGGCAAGCTAAGGAGTGGATCTGAGTTGCAATCAAAATGCTGGGCAAATCCAAAGCTACTGGCCAGGAATTTATCAATGAAGTGGCAACTATCGGAAGGATATACCATTTCAATATGTTATTGCAAAATATATGAGATTTCTTTAGGAGTGGCTTGTGGGAGAGCCTACCTTCATCATGGCTATGACATGCAAATATTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATGACAACTTGAATCCAAAAATTTTGGATTTTGGACTAGGAAGGTTGTATTTTACCAATGATAGTATTGCCACTTTAAGTCTAACAAGAGGAACAATAGGATACATGGCTCCTGAATTATTCTACAAGAACATTGGGAAAGTGTCATATAAAGCTGATGTTTACGGTTTTGGAATGCTCTTAATGGAAATGGCCAGCCGCAGAAGAAACATGAATCCACATGTAGAGCATTCAAGCCAAGTATATTTTCCATCATGGATTCATGACCAATTTGTCGAAGAGAAAGATATAGAAATGGATTATTTGACAGAAGAGGAAAAGGTTTTGGCAAAGAAAATGTTCACAGTAGCGTTATGA 1116 0.3943 MAHQQPQTNPDRDMTGIIKVGVPLAPKMLHSHVSNTRPARGASLSFSFAFRKIPFAAFLSGILAVAADVYSTIYFDSGGKYDGDLISTPVAFALGKITGRYVLPCTLLRFIVGILLLFILLIYTYRRRHLSGYESIEDFIRLYDLHPIRYSYKELKSVTKGFNKKIGEGGFGTVYKGKLRSGSELQSKCWANPKLLARNLSMKWQLSEGYTISICYCKIYEISLGVACGRAYLHHGYDMQILHFDIKPHNILLDDNLNPKILDFGLGRLYFTNDSIATLSLTRGTIGYMAPELFYKNIGKVSYKADVYGFGMLLMEMASRRRNMNPHVEHSSQVYFPSWIHDQFVEEKDIEMDYLTEEEKVLAKKMFTVAL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2419g00001 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pral2419g00001 371 SUPERFAMILY Protein kinase-like (PK-like) 144 342 IPR011009 -
Pral2419g00001 371 ProSiteProfiles Protein kinase domain profile. 59 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2419g00001 371 PANTHER RUST RESISTANCE KINASE LR10-RELATED 134 189 IPR045874 GO:0004672
Pral2419g00001 371 Gene3D Transferase(Phosphotransferase) domain 1 204 363 - -
Pral2419g00001 371 Pfam Protein kinase domain 217 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2419g00001 371 Gene3D Phosphorylase Kinase; domain 1 139 203 - -
Pral2419g00001 371 SMART serkin_6 160 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2419g00001 Pral-Chr2419 13125 17808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2419g00001 93 371 Receptor kinase-like Gene Family AT1G66930 37.288 6.04e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral2419g00001 Pkinase 8.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2419g00001 - - pcin:129321062 358.221