Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2417g00010 ATGTTCAGAGTCTTCCCACAGCCAAATTCTCCTACAAATTCACAAGACGTTAATGCCATCATGGACATCAAGCGTACTTACAGGATCTCCAAAGTAAATTGGCAAGGGGACCCATGCGTGCCGACTGACTTTGCATGGGATGGTGTGAATTGCAGCCGTGCAAACGACGAGACAAGAATTATTTCATTTAATGTCACTGGAAACAAGCTCACAGGTCCAGTTCCCAAGGATTTAAGGGAAAATCCTAATTTAAAGCTCAGTGCAGCCAATAATCCTGGCCTCTGTCAGACAGATTCATGCGACAACAACCAAAAGTTTGTAATCCCTCTTGTTGCATCAGTTACAGTTTTTGTTCTAATTACCATTGCTTCTTTGATGATTTGGAGACTCAGAAAGAAAAGACAAGAACCCCGAAGCGTGGAAATTCTGAAACAAAAGAATCGAGAATTTTCTTACTCACAAGTTCTTCATATCACCGACAATTTCAAAACTCTTATTGGAGAAGGAGGATTCGGGAAAGTTTACCTTGGCACTTTGGAAGATAATTCTCAAGTTGCAGTAAAATTACTTTCAGAATCATCAAAGCAAGGATACAAGGAGTTTCAATCAGAGGCTCAGCTCTTGACGGTTATTCATCACAGAAACTTGGTTTCACTTGTTGGTTATTGTCATGAAAATAACATGAAGGCATTGATTTATGAATATGCGAATAATGGAGACCTTGGCCAACTGTTATCAGAGAGAAACTCAAATGTTTTGAAGTGGAATGAGAGACTTCAAGTAGCAATTGACACAGCAAAAGGATTGGAATATCTTCATACTGGTTGTAAGACTCCTATAATCCATAGAGACTTGAAACCATCCAACATTTTATTGAATAAATCCATGATAGCTAAGATTGCTGATTTTGGACTGTCCAAAGCGTTTACAAACGAAGAAGATTCTCATCTATCCACTCAACCAGCTGGTACTCTTGGTTATATTGATCCGGAATTTCAAAGATCTGGACAACTAAGTAAGAAAAGTGATATCTATAGTTTTGGGATGATTCTTCTTCAACTCATAACATGTCGGCCTCCAGTAAAAAGAGAAATTGAAGATGTCAGTTTCATTATTGATTGGATTAAGCCTAAAATTGAATGTGGGGATATTGAAGGCATTGTGGATCCAAGACTTGAAGGAGCGTTCCATGTTAGTTCAACGTGGAGAGCTATTGAAGTAGCAATGTCATGTGTCCTACCAAAACCTACCCAAAGGCCGGATATAAGTTTCATGTTGCAAGAACTACAGGAAAGTTTGGCTTTGGATAATACTCTCACAAATAGTAGTTTGCATGATTCTGCTGTGAACAGTGAATTAATCACTCTCGTCTCTGCTAGGTAG 1383 0.3883 MFRVFPQPNSPTNSQDVNAIMDIKRTYRISKVNWQGDPCVPTDFAWDGVNCSRANDETRIISFNVTGNKLTGPVPKDLRENPNLKLSAANNPGLCQTDSCDNNQKFVIPLVASVTVFVLITIASLMIWRLRKKRQEPRSVEILKQKNREFSYSQVLHITDNFKTLIGEGGFGKVYLGTLEDNSQVAVKLLSESSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHENNMKALIYEYANNGDLGQLLSERNSNVLKWNERLQVAIDTAKGLEYLHTGCKTPIIHRDLKPSNILLNKSMIAKIADFGLSKAFTNEEDSHLSTQPAGTLGYIDPEFQRSGQLSKKSDIYSFGMILLQLITCRPPVKREIEDVSFIIDWIKPKIECGDIEGIVDPRLEGAFHVSSTWRAIEVAMSCVLPKPTQRPDISFMLQELQESLALDNTLTNSSLHDSAVNSELITLVSAR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2417g00010 460 SUPERFAMILY Protein kinase-like (PK-like) 136 429 IPR011009 -
Pral2417g00010 460 PANTHER OS07G0107800 PROTEIN-RELATED 2 433 - -
Pral2417g00010 460 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 236 443 - -
Pral2417g00010 460 FunFam Leucine-rich repeat receptor-like protein kinase 138 235 - -
Pral2417g00010 460 SMART serkin_6 160 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2417g00010 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Pral2417g00010 460 CDD STKc_IRAK 166 431 - -
Pral2417g00010 460 ProSiteProfiles Protein kinase domain profile. 160 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2417g00010 460 Pfam Protein tyrosine and serine/threonine kinase 162 425 IPR001245 GO:0004672|GO:0006468
Pral2417g00010 460 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Pral2417g00010 460 Gene3D Transferase(Phosphotransferase) domain 1 236 451 - -
Pral2417g00010 460 Gene3D Phosphorylase Kinase; domain 1 142 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2417g00010 Pral-Chr2417 96633 100953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2417g00010 2 443 Receptor kinase-like Gene Family AT1G51850 40.270 5.77e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2417g00010 PK_Tyr_Ser-Thr 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2417g00010 - - pcin:129289942 575.474