Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2417g00009 ATGAAGAGAATGATCTCTTGGATTCTTGCTTTGCTTCTTCTGGTTTCCTTCTTCGCTATTCTTGCAGATGCTGCTAATAGTAGAGGATTGGAATACCTTCTTGCTGGTACTCCTATAATCCATCGAGACTTAAAGCCATCCAACATTCTATTAAGTAAATCTATGACAGCCAAGATTGCTGATTTTGGACTCTCTAGAGTATTTATCAATGAAAGAGACACCCATCTATCAACTCAACCAGCTGGTAATCCCAGTTATATTGATCCTGAATCTGGAAAACTAAACAAGAAAAGTGATATTTATAGTTTTGGAATGATTCTTCTTCAACTCATAACGGGTCGCCATCCAATAAATAGAGGACCTGAGGATATCAGTTTCATTGTTGATTGTATTCAACCTAAAATTGAACGTGGGGATATGGAAGGCATTGTTGATCCAAGATTAGCTGCAGGATTCAGTGCTAATTCAACATGGAAAGCTGTTGAAGTAGCAATTTCATGTGTTACCACCACCACCCCAGAGGCCAGACATAAGTTACATATCGCGAGAACTACAAGAATGTGTAGCTTTGGAGATGGGAATAAATGA 588 0.3861 MKRMISWILALLLLVSFFAILADAANSRGLEYLLAGTPIIHRDLKPSNILLSKSMTAKIADFGLSRVFINERDTHLSTQPAGNPSYIDPESGKLNKKSDIYSFGMILLQLITGRHPINRGPEDISFIVDCIQPKIERGDMEGIVDPRLAAGFSANSTWKAVEVAISCVTTTTPEARHKLHIARTTRMCSFGDGNK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2417g00009 195 PANTHER OS07G0107800 PROTEIN-RELATED 20 172 - -
Pral2417g00009 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2417g00009 195 Gene3D Transferase(Phosphotransferase) domain 1 13 188 - -
Pral2417g00009 195 SUPERFAMILY Protein kinase-like (PK-like) 28 123 IPR011009 -
Pral2417g00009 195 SMART serkin_6 3 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2417g00009 195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Pral2417g00009 195 Pfam Protein kinase domain 28 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2417g00009 Pral-Chr2417 86371 91518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2417g00009 27 188 Receptor kinase-like Gene Family AT4G29180 45.833 3.19e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2417g00009 Pkinase 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2417g00009 - - pcin:129317292 194.126