Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2417g00003 ATGCTAAGAGCTTCACATTTTCCAATGAAAGCGTCTCCAGCTCTCAGTGCTTTGAGGCTATCTCTGATTCCCGCTCTCTCCTGCTCTTCTTCTTCCAATCTTCGCGCCTTCACTTGTTCCCCATCTCTCAAGGTTTCCTCTCATAGATTTCAAATTCCTTTGCACCCTCTTTCTTCCTTCAATTTCTTCCAACTACTTCCTCCAGCGGGGTTGTCACGCCCCCAAGTAGCAGCCTTGTGCAGCAGCAGCAGCAGCAACAACGGTGATGGTGCTAGGGAGATCCTGGTGCAACACTTGCTTGTCAATGAAGATGACCAGAAGCTGCTATTGGATCTTCAGCAGAGAATCTCATCAGGTGAAGACTTGAGTGATCTCGCGGTAGAATACTCAATATGCCCATCCAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGGGAGATGGTTCCTGAATTTGAGGACGCTGCGTTTAATGCACCTTTAAACAAAGTTGTAAGGTGTAAAACAAAATTTGGATGGCACCTTCTTCAAGTTTTATCTGAAAGGGAAGAAACTGTTCTTCAAGACATTCAGCCTGACATGCTTCATGCGAAAATTCAAGATCCCAACTTTATGGAGGAGGCACAATTGATTGATGTTCGAGAGCCTGAGGAAGTGGAGAAAGCACGTCTGCCAGGTTTTAAGGTTCTTCCCCTCCGACAATTTGGAAATTGGGGACCTGATATTAGTAGCACATTTGACCCTAACAAGGATACATATGTCTTGTGTCATCATGGCGTGCGGTCCTTGCAAGTTGCCAAGTGGTTGCAGTCACAGGGATTTAGAAGAGTATACAATGTATCTGGGGGAATCCATGCATATGCTATGAAGGTTGATCCATCAGTCCCAACTTACTAG 900 0.4578 MLRASHFPMKASPALSALRLSLIPALSCSSSSNLRAFTCSPSLKVSSHRFQIPLHPLSSFNFFQLLPPAGLSRPQVAALCSSSSSNNGDGAREILVQHLLVNEDDQKLLLDLQQRISSGEDLSDLAVEYSICPSKDEGGMLGWVRKGEMVPEFEDAAFNAPLNKVVRCKTKFGWHLLQVLSEREETVLQDIQPDMLHAKIQDPNFMEEAQLIDVREPEEVEKARLPGFKVLPLRQFGNWGPDISSTFDPNKDTYVLCHHGVRSLQVAKWLQSQGFRRVYNVSGGIHAYAMKVDPSVPTY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2417g00003 299 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 91 181 IPR000297 GO:0003755
Pral2417g00003 299 Gene3D - 184 296 IPR036873 -
Pral2417g00003 299 Pfam PPIC-type PPIASE domain 96 181 - -
Pral2417g00003 299 Pfam Rhodanese-like domain 206 289 IPR001763 -
Pral2417g00003 299 ProSiteProfiles Rhodanese domain profile. 205 297 IPR001763 -
Pral2417g00003 299 SMART rhod_4 191 294 IPR001763 -
Pral2417g00003 299 SUPERFAMILY FKBP-like 93 180 - -
Pral2417g00003 299 Gene3D - 88 183 IPR046357 GO:0003755
Pral2417g00003 299 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 299 - -
Pral2417g00003 299 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 186 297 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2417g00003 Pral-Chr2417 33220 37676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2417g00003 18 299 Sulfurtransferasese or Rhodanese AT5G19370 57.143 1.29e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2417g00003 - - qsa:O6P43_014704 395.586