Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2412g00006 ATGGCAGATCGACAAGCTGCACAGAGAATAAGGAGACTCGCCATCATCGGCGTGTCTAGTTTCTTGTTGGTGGCCATGGCGGTGGCCGTCACCGTAGGTGTCAGCATGAACCAAAGCGATTCTGAATCAAGCCAACCAAAAGATAACAACAAGTCCCATGTCTCGGATTCAATGAAAGCCGTGACGGACCTGTGTCATCCCACCGATTACAAAAAAGAGTGCGAGGACAGTCTCAAGTCCGAGGCCGGCAACAGCAGCGACCCTAAACAACTCATCAAGATCGTCTTCAACGTCACCATTCGCTCCGTCGGCGAGAGTCTCCAGAAAACCCGTCTCATCCATGAGATTGAGATAGAACCCAGATCCAAGATGGCCCTTGATTCCTGCATGCACCTCATGGCCCTCTCTATCGACGAGTTCAGAAAGTCCGTCCAAAACATGGGTTCATTTGATCTCGCCGGCGTCGACGACATGCTCATGAACCTCAAGGTTTGGATCAGCGGCGCCATCACCTACCAACAGACTTGTTTGGACGGATTTCAGAACACCACCAGCCCGGCTGGTAAACAGATGCAAGATGTTCTGAAACTTACCATGATACACAGCAGCAATATTCTCGCCATCATCAATGACTTCGCCAACAGTCTCGCTCAGCTGAACATAACAAGCTCAACCTCACGTCGACTCCTTGAGGATTTTGAATCCGATCGTCCTGTTTTGGGTCATGGAGACCTGGACATTCCCCTTTGGGCTGAGGTCGGCATGAGAAGATTTCTTGCTACCGGCAAGCTCAAGCCCCATGTTGTTGTAGCCAAGGACGGCACTGGAAAGGTCAGGAGCATTAACGAAGCCTTGAAAATGGTCCCCGAAAATAATGCCAAGCCATTCGTCATCTACGTTAAGGAAGGAGTCTACCATGAGTATGTTCACGTTATGAAGAATCTGACCCGCGTGGTCATGATCGGTGATGGAGGCGACAAGACCCGAGTTACCGGCAATAGAAACTTCGTTGATGGCATTGGCACCTTCAGAACCGCCACCGTTGCCGTCGACGGAGATTTCTTTGTGGCCATAAAGATGGGGTTTGAGAACTCAGCTGGTCCCGAGAAGCATCAAGCCGTTGCCCTAAGAGTGCAAGGTGACATGGCAGTGTTCTACAGATGCGCCATGGATGGGTACCAGGACACACTTTACGCACACGCGATGCGTCAATTCTATAGGGACTGCACCATTTCAGGTACGGTGGACTTCGTTTTTGGTGATGCAATGTCGGTGTTCCAGAACTGTACATTTATAGTGCGGAAGCCATTGGAGGAACAACAATGTATCGTGACGGCACAGGGCAGGAAGGAGAGGCACCAGCCAACGGGAATAGTGATCCAAGGAGGGTCCATCGTGGCAGATCCTAACTTCTACCCAGATAGGTTCAAGAACAAGGTTTACTTGGCTCGTCCATGGAAGATATACTCCAGAACCATATTCATGGACACCTTCATGGATGACTTGATCCAACCTGAAGGGTTTTTGCCGTGGGCAGGCACGCTGGGGCTGGACACGTGCTATTATGCAGAGCACAACAATGACGGCCCAGGTTCTGATAAATCCAAGCGTGCGAAATGGGGCGGCATCAAGAACATCACACCCCAACAAGCAAACACTTATACGCCTCTCAACTTCTTCAAGGGGGACAAGTGGATTAAGATTACTCGCATTCCTTACAACCCTTCTTCTTGGAACTCCAAACACTAA 1749 0.5026 MADRQAAQRIRRLAIIGVSSFLLVAMAVAVTVGVSMNQSDSESSQPKDNNKSHVSDSMKAVTDLCHPTDYKKECEDSLKSEAGNSSDPKQLIKIVFNVTIRSVGESLQKTRLIHEIEIEPRSKMALDSCMHLMALSIDEFRKSVQNMGSFDLAGVDDMLMNLKVWISGAITYQQTCLDGFQNTTSPAGKQMQDVLKLTMIHSSNILAIINDFANSLAQLNITSSTSRRLLEDFESDRPVLGHGDLDIPLWAEVGMRRFLATGKLKPHVVVAKDGTGKVRSINEALKMVPENNAKPFVIYVKEGVYHEYVHVMKNLTRVVMIGDGGDKTRVTGNRNFVDGIGTFRTATVAVDGDFFVAIKMGFENSAGPEKHQAVALRVQGDMAVFYRCAMDGYQDTLYAHAMRQFYRDCTISGTVDFVFGDAMSVFQNCTFIVRKPLEEQQCIVTAQGRKERHQPTGIVIQGGSIVADPNFYPDRFKNKVYLARPWKIYSRTIFMDTFMDDLIQPEGFLPWAGTLGLDTCYYAEHNNDGPGSDKSKRAKWGGIKNITPQQANTYTPLNFFKGDKWIKITRIPYNPSSWNSKH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2412g00006 582 SMART PMEI_2 56 208 IPR006501 GO:0004857
Pral2412g00006 582 Pfam Plant invertase/pectin methylesterase inhibitor 60 207 IPR006501 GO:0004857
Pral2412g00006 582 Pfam Pectinesterase 267 563 IPR000070 GO:0030599|GO:0042545
Pral2412g00006 582 SUPERFAMILY Pectin lyase-like 265 573 IPR011050 -
Pral2412g00006 582 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Pral2412g00006 582 FunFam Pectinesterase 57 213 - -
Pral2412g00006 582 PANTHER PECTINESTERASE 20 567 - -
Pral2412g00006 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 212 IPR035513 -
Pral2412g00006 582 MobiDBLite consensus disorder prediction 37 57 - -
Pral2412g00006 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 212 IPR035513 -
Pral2412g00006 582 CDD PMEI-like_3 64 214 - -
Pral2412g00006 582 FunFam Pectinesterase 261 577 - -
Pral2412g00006 582 NCBIfam pectinesterase inhibitor domain 31 210 IPR006501 GO:0004857
Pral2412g00006 582 Gene3D - 261 576 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2412g00006 Pral-Chr2412 28693 30721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2412g00006 7 573 Carbohydrate Esterase AT3G05610 46.060 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2412g00006 K01051 - gmx:100794799 733.406