LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2411g00004	ATGGCTAGGTCTCAGCCTCTAGCTTCCACCATGATCGTCCTCCTTCTCCTTCTCGTCGCCACTGAGATGGGGCCGATGATGGCAGAAGCGAGGACGTGCGAGTCTCAGAGCCACCGCTTCAGGGGAGCCTGTATCAGCAAATCTAACTGCGCCAACGTTTGTCGGACTGAGGGATTCCCCGGCGGCCACTGCCGCGGCTTCCGACGACGCTGCTTCTGCACCCGACCTTGTTGA	234	0.6026	MARSQPLASTMIVLLLLLVATEMGPMMAEARTCESQSHRFRGACISKSNCANVCRTEGFPGGHCRGFRRRCFCTRPC	77

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2411g00004	77	Pfam	Gamma-thionin family	31	77	-	-
	Pral2411g00004	77	Gene3D	-	31	77	IPR036574	-
	Pral2411g00004	77	SUPERFAMILY	Scorpion toxin-like	31	77	IPR036574	-
	Pral2411g00004	77	SMART	gth_4	32	77	IPR003614	GO:0006952
	Pral2411g00004	77	ProSitePatterns	Gamma-thionins family signature.	31	54	IPR008176	GO:0006952
	Pral2411g00004	77	PRINTS	Purothionin signature	32	47	IPR008176	GO:0006952
	Pral2411g00004	77	PRINTS	Purothionin signature	62	76	IPR008176	GO:0006952
	Pral2411g00004	77	PANTHER	DEFENSIN-LIKE PROTEIN 1	10	74	-	-
	Pral2411g00004	77	CDD	Knot1	42	74	IPR003614	GO:0006952
	Pral2411g00004	77	FunFam	Defensin-like protein CAL1	31	77	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2411g00004	Pral-Chr2411	25075	25745	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2411g00004	1	77	Plant Defensins Gene Families	AT2G02100	64.935	2.64e-34	110

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2411g00004	-		-	gmx:100798577	91.2781

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