Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2407g00001 ATGGCAGACACAAGCTCAGTTGGAATAATTTTGGACTTTCTAAGGAGGAATCGGTTCACGAAAGCTGAGGCAGCTCTTCTCAGTGAACTCAATAATCGTCATGACTTAAATGGCTTCCTTGAGAAGCTTAACCTGGAAGAAAAGGCCTTGCATAAGTCAGAAAAGGATAAGGGCAAATCTGTGGGAGACAATCAAGGACTGGATTCTCATGACAATGTTGAAGTTTCTGAGGAACTGATTGTGAAGGAAATAGAGTGTGGGAGTGGTGGAAATGCAACAGAAAGCAAAAATAAAAGTATTTCTTTTATTGGGGAATGGAAAAAAACTAATGAAGTGGTTGGGGCAAGTGACAAATACTTTGCTTTACCCAAGAATTCAGAGGATAAGATGCTTGATCTATACCCAAGGAAGTTAAATTCTGGCAATGGTCGTGTGGAGCCTCACCAAAATGGCGGTGGTAGTGCCAGTAATACTTCAAAGGCCATGGTTTTTCATCAAACAAGTGAAGTTCATGATATGGCCAACAATAATGCAAAATCTGCAGAGGGAAATGCTGTGACTACTGAGATACAGTTCTCATGGCCTGGAAGTAACAACAGATCCTCTGCGGAACATAGATATCATGGTGAGCAACCCAAAGAACCTAGTGAACATGATTGCCCACTGAAATCGAAGAACTCATCTTTTAAAGAGAACTTTGCAGATAATTTCTGGTCAAGAAAGGATGAGAATGAAATTTCATCTTCAGACCTGCAGAATGATTGTTCTGTCAAGGCTGCTTTTCCCCTCCCCAAGGGAGATATGTCTACAAGATATGATGGTGCGGCTTTCTCTAAAAGAATAGAGGGAAGAAGGACAGAAATAATTGGTGCCACGGAGGCAATGAAAATGCAGGTAGATGAAGTAGCAAGAGCTATTTATGCAGTTGATTTACAGGGAAATTCAGAACAGAAGACCATTGGCAGCTTAAATTTTCCTGTTGCACCTGAGAATCAAGAGGAGGAGTTACCAAGGCTTCCTCCTGTTAATCTCAAGTCAGAGGACAGGCTCTTGGCTGTTAATTGGGAGGAGAAATTTGAGCAGGATGAACCTGCTTCAAAAGTTGCCTTTGTTGACAACGATTCTCTCATAGGATCATATTTGGATGTTCCTGTTGGACAAGAAATTAACCTTGCAGGAATGAGGAGAGCTGCAGGGGACTGTTGGCTATCTATAAATCAAGGGATTACAGAGGATACATCGGATCTTGTGTCTGGTTTTGCCACGATTGGTGATGGATTGGGTGAATCTGTTGACTATTCTAATGAATATTGGGACTCTGATGAATATGAAGATGATGACGATGTTGGCTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCACACGAAATTGATTATCCGAGTGACAATGAAAAGGCAACTGGGCATGAAAGTGTTCCAGATACTCAGGACAGAGGTCCGGTCAAAGATGAAGATTATAATCAATTTTTTGGTGAAGATTCTTACTTCTCTGGAGAGCAGTATGTTCAACAAAAGAATGTTGAACCAGTCATAATGTCAGATGATTCAATTGGTTTGACGATAACTGAAATGTATGGAAGCACTAAAGAGAATGGATTAATGGTTCGGTATGATGGACAATCGATGGATGAAGAGCTGAATATAATGCCTGCAAAACCTGTCTGGCAGGGCTTTGTCCCTCAGACAAATGAATTGGTCCTGCTAGGAGATGGGCAGGCTCTGAATAACAGGGAAAGATCACAACTCGTGGATATATGCATTGATGATTATCAGCATGGTTCAGTTAGGTCAATTGGGGTGGGGATCAACAGTGATGCTGCGGACATTGGCAATGAAGTTCGTGAAAGTTTGGGTGGTGGTAGCAGGGAAGGGAATTTGGAATATCCCTGTGATTGTGATGTAGGACATGGTTGTTCCAGACACTCCCAGCATGATTTGGATAAAAAGTCTATTAATAAATTGAACAAAAATAAGCAGAAAAATGGCAAGAGTGAGGTAAGTAAGTATGTCACCGGGGATGATAAAGGTGCATTCTTGCAGATTAATGGTCATTCTGATGGAAGCTTCTCATATCCTCAATCACCAAAAGGTGGCCAGATAATCCAGGCTGGTTCCAGTAAGCCCCTATGGTCAGATAACAGCAATGCTGATGAACATGATGACTATCTTAATGCATATGTGAGATCTAATGACATGCTTACTTCTTGGGACCAGAAAAGCGGTGATTCTTCACCCATTAAAAGTTTAAGGAATGAGAATAATGCTAATGAAGTAAGATCAACTAACTCTTCTCCAACAGCAGTCTCAAATTATGGATATACTGAAAAAGCGCAGGTTATGTTAGAAGAAGATGAACAAGTTGACATTGCAGGGGAAGAAGATTTAGGGACATTGCTGGAGGATGAAGATGCTGCTGCTGTTCAAGAGCAATTAAAGCAAATAAAGGCTCAGGAAGAGGAGTTTGAAACCTTCAATTTAAAGATTATGCATAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTTACTGAGTATCTGGGATCTGCTGCGTTCAGCAAAGCCATACAAGCTCATGACTTGCATACAGGCATGGATGTTTGTGTTAAAATAATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGACGAGATTAAGCTTCTCAAGTATGTCAATAAATATGATCCTGCAGACAAGTATCACATTCTTCGGTTGTATGATTATTTCTATTATCGAGAACATCTGTTAATAGTGTGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATATAATAGAGAATCAGGGGGCGAAGTATACTTCACAATGCCGAGATTGCAGTCAATTACAATTCAGTGTTTGGAAGCGCTTCAGTTTTTGCACAGCCTTGGACTAATACATTGTGACCTGAAGCCAGAGAATATTTTGGTGAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGGAGTAGTTGTTATGAGACTGATCACCTTTGCTCATACGTCCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATATTGGGACTTCCATATGACAAGAAGATTGATATATGGTCACTTGGCTGCATTTTGGCAGAACTTTGCACTGGCAATGTCCTCTTTCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGCATCATTGGTCTAATTGATCAAAGTATGCTCACCAAAGGAAGGGATACATATAAGTACTTCACCAAAAATCATATGCTTTACGAAAGGAATCAGGAAACCAACAGGTTAGAATACTTGATTCCCAAGAAGACATCTTTGAGGCACAGATTGCCAATGGGAGACCAAGGCTTCGTTGACTTTGTTGCTTATTTGCTTGAGGTTGAGCCAAAGAAGCGGCCTTCTGCTACAGAGGCCCTTAAGCATCCATGGTTATCATACCCATACGAACCCGTATCATCTTGA 3531 0.4084 MADTSSVGIILDFLRRNRFTKAEAALLSELNNRHDLNGFLEKLNLEEKALHKSEKDKGKSVGDNQGLDSHDNVEVSEELIVKEIECGSGGNATESKNKSISFIGEWKKTNEVVGASDKYFALPKNSEDKMLDLYPRKLNSGNGRVEPHQNGGGSASNTSKAMVFHQTSEVHDMANNNAKSAEGNAVTTEIQFSWPGSNNRSSAEHRYHGEQPKEPSEHDCPLKSKNSSFKENFADNFWSRKDENEISSSDLQNDCSVKAAFPLPKGDMSTRYDGAAFSKRIEGRRTEIIGATEAMKMQVDEVARAIYAVDLQGNSEQKTIGSLNFPVAPENQEEELPRLPPVNLKSEDRLLAVNWEEKFEQDEPASKVAFVDNDSLIGSYLDVPVGQEINLAGMRRAAGDCWLSINQGITEDTSDLVSGFATIGDGLGESVDYSNEYWDSDEYEDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKATGHESVPDTQDRGPVKDEDYNQFFGEDSYFSGEQYVQQKNVEPVIMSDDSIGLTITEMYGSTKENGLMVRYDGQSMDEELNIMPAKPVWQGFVPQTNELVLLGDGQALNNRERSQLVDICIDDYQHGSVRSIGVGINSDAADIGNEVRESLGGGSREGNLEYPCDCDVGHGCSRHSQHDLDKKSINKLNKNKQKNGKSEVSKYVTGDDKGAFLQINGHSDGSFSYPQSPKGGQIIQAGSSKPLWSDNSNADEHDDYLNAYVRSNDMLTSWDQKSGDSSPIKSLRNENNANEVRSTNSSPTAVSNYGYTEKAQVMLEEDEQVDIAGEEDLGTLLEDEDAAAVQEQLKQIKAQEEEFETFNLKIMHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKYDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKYNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCYETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGLIDQSMLTKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFVDFVAYLLEVEPKKRPSATEALKHPWLSYPYEPVSS 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2407g00001 1176 Coils Coil 817 837 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 51 71 - -
Pral2407g00001 1176 ProSiteProfiles Protein kinase domain profile. 865 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 472 491 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 138 158 - -
Pral2407g00001 1176 FunFam Putative serine/threonine-protein kinase dyrk2 859 946 - -
Pral2407g00001 1176 Gene3D Phosphorylase Kinase; domain 1 859 946 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 649 678 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 203 225 - -
Pral2407g00001 1176 FunFam Serine/threonine-protein kinase ppk15 944 1168 - -
Pral2407g00001 1176 SMART serkin_6 865 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2407g00001 1176 PANTHER DUAL SPECIFICITY PROTEIN KINASE 411 1167 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 746 780 - -
Pral2407g00001 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 991 1003 IPR008271 GO:0004672|GO:0006468
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 192 226 - -
Pral2407g00001 1176 CDD PKc_DYRK_like 865 1167 - -
Pral2407g00001 1176 Gene3D Transferase(Phosphotransferase) domain 1 919 1167 - -
Pral2407g00001 1176 MobiDBLite consensus disorder prediction 143 158 - -
Pral2407g00001 1176 Pfam Protein kinase domain 865 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2407g00001 1176 SUPERFAMILY Protein kinase-like (PK-like) 854 1169 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2407g00001 Pral-Chr2407 873 9977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2407g00001 863 1162 MAP Kinase Gene Family AT5G19010 30.625 1.42e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral2407g00001 Pkinase 7.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2407g00001 - - cave:132185888 1604.73