Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2404g00012 ATGGCTTGTGTCGGTTTGATTGCTATTCTCACCACCTTATCTGTATATTGCACTCGGAAGAGAAAAACAAGAGATGAAGTTGCAGAAGAAGAATTAGAGTTAGATTCCCCAACAAATAAAGAACGACATGCTGAAGATGGAGAACAACCAAGCTTATCTTTTTTCAGCATCAAAACCATAATGACTGCAACAAACAATTTCTCAAATGAGAATCAACTAGGGCAGGGTGGATTTGGTTCTGTATACAAGGGCTTACTAGATAATGGACTAGATATAGCAGTGAAAAGATTGTCTCAAGGTTCTAGACAAGGAACTCAAGAGTTCAAGAATGAAATTAAGGTGATTGGAAGATTACAACACAGGAATCTTGTAAAATTACTTGGTTATTGCATTCATAAGGGAGAAAGGATGTTGATATATGAATACCTACCCAACAAAAGCTTGGATTTCTTTCTCTTTGACTCAAATCATAGAATGTCATTAGATTGGGACACACGTTTTCATATTATTTTTGGAATTGCTCGAGGTCTTCTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGACCTTAAAGCTAGCAATGTTCTTTTAGATGCTACAATGAATCCCAAGATTTCAGATTTTGGCATGGCTAGAATATTTGGTGAGGATCAACTCGAAGCAAAAACGCGACAAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGTAATGATAGGACAATATTCAGTGAAGTCTGATGCTTTTAGCTTTGGTATTCTTTTGCTGGAGATTATCAGTGGCAAGAGAAGTACCTATTGTGATAAAGAAAGATCATCCCTAAATTTGATTGGGCAGGTGTGGGACTTATGGAAAGAAGGAAAAGCCTTGGACATAATGGACTCAACACTTGGCAAATCATATCCTCTTGACACAGCCCTAAGGTGTACACAAATTGGGCTCTTATGTGTACAAGAAAGTGCCTTCTATAGACCATCCATGTTAGACGTTGTTTTCATGCTTGGCAATGAAGTAAGTATACCCTCACCTCACAAGCCTGCTTTCCTATTCAATTATGAAATAAAGCAATCAGAGTCTTCATCATCGGGAGATCCTTCAGTAAACGCTATGACTACTACTTCAATCGATGCTCGGTAA 1149 0.3742 MACVGLIAILTTLSVYCTRKRKTRDEVAEEELELDSPTNKERHAEDGEQPSLSFFSIKTIMTATNNFSNENQLGQGGFGSVYKGLLDNGLDIAVKRLSQGSRQGTQEFKNEIKVIGRLQHRNLVKLLGYCIHKGERMLIYEYLPNKSLDFFLFDSNHRMSLDWDTRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGEDQLEAKTRQIVGTYGYMSPEYVMIGQYSVKSDAFSFGILLLEIISGKRSTYCDKERSSLNLIGQVWDLWKEGKALDIMDSTLGKSYPLDTALRCTQIGLLCVQESAFYRPSMLDVVFMLGNEVSIPSPHKPAFLFNYEIKQSESSSSGDPSVNAMTTTSIDAR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2404g00012 382 Gene3D Transferase(Phosphotransferase) domain 1 143 345 - -
Pral2404g00012 382 Pfam Protein tyrosine and serine/threonine kinase 69 277 IPR001245 GO:0004672|GO:0006468
Pral2404g00012 382 ProSiteProfiles Protein kinase domain profile. 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00012 382 CDD STKc_IRAK 73 338 - -
Pral2404g00012 382 MobiDBLite consensus disorder prediction 361 382 - -
Pral2404g00012 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral2404g00012 382 SMART serkin_6 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00012 382 SUPERFAMILY Protein kinase-like (PK-like) 49 355 IPR011009 -
Pral2404g00012 382 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 143 345 - -
Pral2404g00012 382 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Pral2404g00012 382 Gene3D Phosphorylase Kinase; domain 1 28 142 - -
Pral2404g00012 382 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 142 - -
Pral2404g00012 382 Pfam Domain of unknown function (DUF3403) 340 382 IPR021820 GO:0004674
Pral2404g00012 382 MobiDBLite consensus disorder prediction 27 48 - -
Pral2404g00012 382 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2404g00012 Pral-Chr2404 111221 114237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2404g00012 2 379 Receptor kinase-like Gene Family AT4G05200 49.340 3.98e-125 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2404g00012 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2404g00012 - - pcin:129285511 610.142