Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2404g00010 ATGCTTCACTTTATTAACCATCGCTGGTCGCCAGAACCAAATTTGCAACAGCACTGGTGGTTCTTGGTGAAGTTAGGGGTAGACCAGGTCCCAGGACAACTAATCATGGCAGCAAAAGAACTGCTTACTTTGTTTGTCATAATCCATCACTGCTTCTTGTTTTGCGCAGCTACTGATATCATAACCACTGACAAGCCTCTAAGTGATGGTGATATTCTCATTTCTAAGGAAAATAAGTTTGCTCTTGGGTTCTTCGCTCCAGGCAAATCAAACTATCGCTATGTAGGAATTTGGTACTACAATTTGCAACAGCAGACTGTTGTTTGGGTTTCAAATAGAGACAATCCCATGAATGACACCTCTGGAGTTCTCTCTATCAGCTCAAATGGAAATCTGGTTCTGCATGGTAACTATTCTGACATGCCCCTCTGGTCTACGAATGCTTCTGTCACTGTTCCAAATACAGAAGTTATGGTTCAACTCACAGATTTAGGTAACCTCGTTTTGATTCAAAATGATTCCAAAACTATTATCTGGCAGAGCTTTGATCATCCTACCGATACCTTGCTTCCGTATGCCAGAATTGGAGTCAACAAAAGAACTGGTCAGAGTGAGTTCTTGCAGTCATGGAAGACCGAGGATGATCCTGGAACAGGAAGCTTCTCTGTTGGGTTCAATACTAGTGGGAAATCCCAGTTGTTCTTGTACAATAATAATGCCCCATGGTGGCGTATTGGATCCTTCAACGGCGAAATGTATGTTGGCAATCCGTTTATGAAACAAGCAATGGCAAGTGATTTCAATATGACCATCTTGGATGATGACAATGAGGTTGCGTTTAGATATAACGCTTTTGACAAGACAATTATTGTGCGGGCGGTAGCTCTTCAATCTGGATCTTTTCAAGTACTGATATGGGATTCTAATAAGATACAATGGAATCGATACTGGTATGGTCCAAAAGTAGATTGTGACATGTATGGTTCCTGTGGGGCCAATGGAAACTGTGACTCTTATGACTATGCGTATTTCAAGTGTTTCTGCCTACCTGGGTTTGAACCCAAAAATCCAACAGATTGGTATCAACATTTCCATCGAACAGAGGGTTGTGTGAGGAAGAAAGGGCCATCCGTGTGTGGGAATAATGGAGAAGGCTTTGTCAGAGTAGAAAGGGTTAAAATTCCTGATACATCTTTAGCAAATGTTAATATGAATATGAGTGTGGAAGAATGTAAACAAGAGTGCTTGAGAAACTGTTCTTGTAATGCCTATGCAGCTGCAGATGTGAGAAATGGAGGAAGTGGGTGCTTAGCTTGGCATGGGACTTTGACGGACACAATGGTTTTAAGTGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCACTGAACTTGCAAAATATGCTAGGAAATCAAAAGGAGAGCTTTCCAAGTTTGGGAAAGTGGGAATAGCAATGGCTTGTGTCGCTTTGATTGCTCTTCTCACCACCTTATCTGTATATTGCATTCGGAAGAGAAAAACAAGAGATGAAATTGGAGAGCAAGAATTAGAGTTAGATTCCCCAACGAATCAAGAACGATATGGTGAAGATGGAGGACAATCAAGCTTAACATTTTTCAGCATCAAAACCATAATGACTGCAACAAACAATTTCTCAAATGAGAATCAACTAGGGCAGGGTGGATTTGGTTCTGTATACAAGGGCTTACTAGATAATGGACTAGATATAGCAGTGAAAAGATTGTCACAAGGTTCTGGACAAGGGATTGGAGAGTTCAAGAATGAAATTAGATTAATTGCAATGCTGCAACATAGGAATCTTGTTAAGTTGCTTGGGTATTGCATTCATAAGGAAGAAAGGATGTTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTCTTTGAAATGTTTAGTGGCAATACTTTGAAAGGGCTCAGTATTCGTTTTCAACTCTTCATCAATATGTATCAAAGACAGCTATAG 1995 0.4035 MLHFINHRWSPEPNLQQHWWFLVKLGVDQVPGQLIMAAKELLTLFVIIHHCFLFCAATDIITTDKPLSDGDILISKENKFALGFFAPGKSNYRYVGIWYYNLQQQTVVWVSNRDNPMNDTSGVLSISSNGNLVLHGNYSDMPLWSTNASVTVPNTEVMVQLTDLGNLVLIQNDSKTIIWQSFDHPTDTLLPYARIGVNKRTGQSEFLQSWKTEDDPGTGSFSVGFNTSGKSQLFLYNNNAPWWRIGSFNGEMYVGNPFMKQAMASDFNMTILDDDNEVAFRYNAFDKTIIVRAVALQSGSFQVLIWDSNKIQWNRYWYGPKVDCDMYGSCGANGNCDSYDYAYFKCFCLPGFEPKNPTDWYQHFHRTEGCVRKKGPSVCGNNGEGFVRVERVKIPDTSLANVNMNMSVEECKQECLRNCSCNAYAAADVRNGGSGCLAWHGTLTDTMVLSDEGHDLYVRVDATELAKYARKSKGELSKFGKVGIAMACVALIALLTTLSVYCIRKRKTRDEIGEQELELDSPTNQERYGEDGGQSSLTFFSIKTIMTATNNFSNENQLGQGGFGSVYKGLLDNGLDIAVKRLSQGSGQGIGEFKNEIRLIAMLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLDFFLFEMFSGNTLKGLSIRFQLFINMYQRQL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2404g00010 664 ProSiteProfiles Protein kinase domain profile. 552 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00010 664 CDD PAN_AP_plant 379 460 - -
Pral2404g00010 664 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 54 182 - -
Pral2404g00010 664 SMART ntp_6 381 460 IPR003609 -
Pral2404g00010 664 Pfam D-mannose binding lectin 106 211 IPR001480 -
Pral2404g00010 664 CDD B_lectin 64 185 IPR001480 -
Pral2404g00010 664 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 216 IPR036426 -
Pral2404g00010 664 SUPERFAMILY Protein kinase-like (PK-like) 534 642 IPR011009 -
Pral2404g00010 664 Pfam S-locus glycoprotein domain 243 356 IPR000858 GO:0048544
Pral2404g00010 664 Gene3D Phosphorylase Kinase; domain 1 520 627 - -
Pral2404g00010 664 Pfam Protein tyrosine and serine/threonine kinase 554 639 IPR001245 GO:0004672|GO:0006468
Pral2404g00010 664 ProSitePatterns Protein kinases ATP-binding region signature. 558 580 IPR017441 GO:0005524
Pral2404g00010 664 ProSiteProfiles Bulb-type lectin domain profile. 58 182 IPR001480 -
Pral2404g00010 664 ProSiteProfiles PAN/Apple domain profile. 379 461 IPR003609 -
Pral2404g00010 664 SMART blect_4 64 185 IPR001480 -
Pral2404g00010 664 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 627 - -
Pral2404g00010 664 Pfam PAN-like domain 379 445 IPR003609 -
Pral2404g00010 664 SMART tyrkin_6 552 664 IPR020635 GO:0004713|GO:0006468
Pral2404g00010 664 Gene3D Hepatocyte Growth Factor 377 457 - -
Pral2404g00010 664 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 44 637 - -
Pral2404g00010 664 ProSiteProfiles EGF-like domain profile. 320 358 IPR000742 -
Pral2404g00010 664 Gene3D - 53 183 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2404g00010 Pral-Chr2404 82803 86630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2404g00010 528 639 Receptor kinase-like Gene Family AT4G04500 62.500 1.65e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2404g00010 S_locus_glycop 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2404g00010 - - pcin:129286378 928.702