Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2404g00007 ATGCTTCACTTTATTAACCATCGCTGGTCGCCAGAACCAAATTTGCAACAGCACTGGTGGTTCTTGGTGAAGTTAGGGGTAGACCAGGTCCCAGGACAACTAATCATGGCAGCAAAAGAACTGCTTACTTTGTTTGTCATAATCCATCACTGCTTCTTGTTTTGCGCAGCTACTGATATCATAACCACTGACAAGCCTCTAAGTGATGGTGATATTCTCATTTCTAAGGAAAATAAGTTTGCTCTTGGGTTCTTCGCTCCAGGCAAATCAAACTATCGCTATGTAGGAATTTGGTACTACAATTTGCAACAGCAGACTGTTGTTTGGGTTTCAAATAGAGACAATCCCATGAATGACACCTCTGGAGTTCTCTCTATCAGCTCAAATGGAAATCTGGTTCTGCATGGTAACTATTCTGACATGCCCCTCTGGTCTACGAATGCTTCTGTCACTGTTCCAAATACAGAAGTTATGGTTCAACTCACAGATTTAGGTAACCTCGTTTTGATTCAAAATGATTCCAAAACTATTATCTGGCAGAGCTTTGATCATCCTACCGATACCTTGCTTCCGTATGCCAGAATTGGAGTCAACAAAAGAACTGGTCAGAGTGAGTTCTTGCAGTCATGGAAGACCGAGGATGATCCTGGAACAGGAAGCTTCTCTGTTGGGTTCAATACTAGTGGGAAATCCCAGTTGTTCTTGTACAATAATAATGCCCCATGGTGGCGTATTGGATCCTTCAACGGCGAAATGTATGTTGGCAATCCGTTTATGAAACAAGCAATGGCAAGTGATTTCAATATGACCATCTTGGATGATGACAATGAGGTTGCGTTTAGATATAACGCTTTTGACAAGACAATTATTGTGCGGGCGGTAGCTCTTCAATCTGGATCTTTTCAAGTACTGATATGGGATTCTAATAAGATACAATGGAATCGATACTGGTATGGTCCAAAAGTAGATTGTGACATGTATGGTTCCTGTGGGGCCAATGGAAACTGTGACTCTTATGACTATGCGTATTTCAAGTGTTTCTGCCTACCTGGGTTTGAACCCAAAAATCCAACAGATTGGTATCAACATTTCCATCGAACAGAGGGTTGTGTGAGGAAGAAAGGGCCATCCGTGTGTGGGAATAATGGAGAAGGCTTTGTCAGAGTAGAAAGGGTTAAAATTCCTGATACATCTTTAGCAAATGTTAATATGAATATGAGTGTGGAAGAATGTAAACAAGAGTGCTTGAGAAACTGTTCTTGTAATGCCTATGCAGCTGCAGATGTGAGAAATGGAGGAAGTGGGTGCTTAGCTTGGCATGGGACTTTGACGGACACAATGGTTTTAAGTGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCACTGAACTTGCAAAATATGCTAGGAAATCAAAAGGAGAGCTTTCCAAGTTTGGGAAAGTGGGAATAGCAATGGCTTGTGTCGCTTTGATTGCTCTTCTCACCACCTTATCTGTATATTGCATTCGGAAGAGAAAAACAAGAGATGAAATTGGAGAGCAAGAATTAGAGTTAGATTCCCCAACGAATCAAGAACGATATGGTGAAGATGGAGGACAATCAAGCTTAACATTTTTCAGCATCAAAACCATAATGACTGCAACAAACAATTTCTCAAATGAGAATCAACTAGGGCAGGGTGGATTTGGTTCTGTATACAAGGGCTTACTAGATAATGGACTAGATATAGCAGTGAAAAGATTGTCACAAGGTTCTGGACAAGGGATTGGAGAGTTCAAGAATGAAATTAGATTAATTGCAATGCTGCAACATAGGAATCTTGTTAAGTTGCTTGGGTATTGCATTCATAAGGAAGAAAGGATGTTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTCTTTGACTCAAATCATAGAATGTCATTAGATTGGGACACACGTTTTCATATTATTTTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCAAGATTCAAGACTGAAAATAATTCATAGAGACCTTAAAGTTAGTAATGTTCTTTTAGATGCTACAATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGTGAGGATCAAGTCCAAGCAAAAACTCGACGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGGCAGGACAATATTCAACAAAGTCTGATGTTTTTAGCTTTGGTGTTCTTTTGCTGGAGATTATCAGTGGCAAGAGAAATACCTATGGTGATAAAGAAAGATCATCCCTAAATTTGATTGGGCAGGTGTGGGACTTATGGGGAGAAGGAAAAGCCTTGGACATAATGGACTCAACACTTGGCAAATCATATCCTCTTGACACATCCCTAAGGTGTATACAAATTGGGCTCTTGTGTGTGCAAGAAAGTGCCTTCTATAGACCATCCATGTTAGACGTCATTTTCATGCTTGGCAATGAAGTAAGCATACCGTCACCTCACAAGCCTGCTTTCCTATTCAATTATGAAATAAAGCATTTAGAGTCTTCATCATCGGGAGATCCTTCAATAAACGTTATGACTACTTCAATCGATGCTCGGTAA 2601 0.3991 MLHFINHRWSPEPNLQQHWWFLVKLGVDQVPGQLIMAAKELLTLFVIIHHCFLFCAATDIITTDKPLSDGDILISKENKFALGFFAPGKSNYRYVGIWYYNLQQQTVVWVSNRDNPMNDTSGVLSISSNGNLVLHGNYSDMPLWSTNASVTVPNTEVMVQLTDLGNLVLIQNDSKTIIWQSFDHPTDTLLPYARIGVNKRTGQSEFLQSWKTEDDPGTGSFSVGFNTSGKSQLFLYNNNAPWWRIGSFNGEMYVGNPFMKQAMASDFNMTILDDDNEVAFRYNAFDKTIIVRAVALQSGSFQVLIWDSNKIQWNRYWYGPKVDCDMYGSCGANGNCDSYDYAYFKCFCLPGFEPKNPTDWYQHFHRTEGCVRKKGPSVCGNNGEGFVRVERVKIPDTSLANVNMNMSVEECKQECLRNCSCNAYAAADVRNGGSGCLAWHGTLTDTMVLSDEGHDLYVRVDATELAKYARKSKGELSKFGKVGIAMACVALIALLTTLSVYCIRKRKTRDEIGEQELELDSPTNQERYGEDGGQSSLTFFSIKTIMTATNNFSNENQLGQGGFGSVYKGLLDNGLDIAVKRLSQGSGQGIGEFKNEIRLIAMLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLDFFLFDSNHRMSLDWDTRFHIIFGIARGLLYLHQDSRLKIIHRDLKVSNVLLDATMNPKISDFGMARIFGEDQVQAKTRRIVGTYGYMSPEYAMAGQYSTKSDVFSFGVLLLEIISGKRNTYGDKERSSLNLIGQVWDLWGEGKALDIMDSTLGKSYPLDTSLRCIQIGLLCVQESAFYRPSMLDVIFMLGNEVSIPSPHKPAFLFNYEIKHLESSSSGDPSINVMTTSIDAR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2404g00007 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 627 - -
Pral2404g00007 866 ProSiteProfiles Protein kinase domain profile. 552 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00007 866 Gene3D Phosphorylase Kinase; domain 1 520 627 - -
Pral2404g00007 866 SMART serkin_6 552 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00007 866 ProSitePatterns Protein kinases ATP-binding region signature. 558 580 IPR017441 GO:0005524
Pral2404g00007 866 ProSiteProfiles Bulb-type lectin domain profile. 58 182 IPR001480 -
Pral2404g00007 866 ProSiteProfiles PAN/Apple domain profile. 379 461 IPR003609 -
Pral2404g00007 866 SMART blect_4 64 185 IPR001480 -
Pral2404g00007 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Pral2404g00007 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 628 830 - -
Pral2404g00007 866 ProSiteProfiles EGF-like domain profile. 320 358 IPR000742 -
Pral2404g00007 866 SUPERFAMILY Protein kinase-like (PK-like) 535 842 IPR011009 -
Pral2404g00007 866 CDD PAN_AP_plant 379 460 - -
Pral2404g00007 866 Pfam PAN-like domain 379 445 IPR003609 -
Pral2404g00007 866 Gene3D Hepatocyte Growth Factor 377 457 - -
Pral2404g00007 866 Gene3D - 53 183 IPR036426 -
Pral2404g00007 866 SMART ntp_6 381 460 IPR003609 -
Pral2404g00007 866 PIRSF SRK 32 866 IPR024171 GO:0004674
Pral2404g00007 866 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 44 815 - -
Pral2404g00007 866 CDD B_lectin 64 185 IPR001480 -
Pral2404g00007 866 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 216 IPR036426 -
Pral2404g00007 866 CDD STKc_IRAK 558 823 - -
Pral2404g00007 866 Pfam D-mannose binding lectin 106 211 IPR001480 -
Pral2404g00007 866 Gene3D Transferase(Phosphotransferase) domain 1 628 829 - -
Pral2404g00007 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 54 182 - -
Pral2404g00007 866 Pfam Protein tyrosine and serine/threonine kinase 555 760 IPR001245 GO:0004672|GO:0006468
Pral2404g00007 866 Pfam S-locus glycoprotein domain 243 356 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2404g00007 Pral-Chr2404 81708 86630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2404g00007 460 855 Receptor kinase-like Gene Family AT4G05200 49.749 4.71e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2404g00007 PK_Tyr_Ser-Thr 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2404g00007 - - pcin:129286378 1299.26