Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2404g00006 ATGCTTCACTTTATTAACCATCGCTGGTCGCCAGAACCAAATTTGCAACAGCACTGGTGGTTCTTGGTGAAGTTAGGGGTAGACCAGGTCCCAGGACAACTAATCATGGCAGCAAAAGAACTGCTTACTTTGTTTGTCATAATCCATCACTGCTTCTTGTTTTGCGCAGCTACTGATATCATAACCACTGACAAGCCTCTAAGTGATGGTGATATTCTCATTTCTAAGGAAAATAAGTTTGCTCTTGGGTTCTTCGCTCCAGGCAAATCAAACTATCGCTATGTAGGAATTTGGTACTACAATTTGCAACAGCAGACTGTTGTTTGGGTTTCAAATAGAGACAATCCCATGAATGACACCTCTGGAGTTCTCTCTATCAGCTCAAATGGAAATCTGGTTCTGCATGGTAACTATTCTGACATGCCCCTCTGGTCTACGAATGCTTCTGTCACTGTTCCAAATACAGAAGTTATGGTTCAACTCACAGATTTAGGTAACCTCGTTTTGATTCAAAATGATTCCAAAACTATTATCTGGCAGAGCTTTGATCATCCTACCGATACCTTGCTTCCGTATGCCAGAATTGGAGTCAACAAAAGAACTGGTCAGAGTGAGTTCTTGCAGTCATGGAAGACCGAGGATGATCCTGGAACAGGAAGCTTCTCTGTTGGGTTCAATACTAGTGGGAAATCCCAGTTGTTCTTGTACAATAATAATGCCCCATGGTGGCGTATTGGATCCTTCAACGGCGAAATGTATGTTGGCAATCCGTTTATGAAACAAGCAATGGCAAGTGATTTCAATATGACCATCTTGGATGATGACAATGAGGTTGCGTTTAGATATAACGCTTTTGACAAGACAATTATTGTGCGGGCGGTAGCTCTTCAATCTGGATCTTTTCAAGTACTGATATGGGATTCTAATAAGATACAATGGAATCGATACTGGTATGGTCCAAAAGTAGATTGTGACATGTATGGTTCCTGTGGGGCCAATGGAAACTGTGACTCTTATGACTATGCGTATTTCAAGTGTTTCTGCCTACCTGGGTTTGAACCCAAAAATCCAACAGATTGGTATCAACATTTCCATCGAACAGAGGGTTGTGTGAGGAAGAAAGGGCCATCCGTGTGTGGGAATAATGGAGAAGGCTTTGTCAGAGTAGAAAGGGTTAAAATTCCTGATACATCTTTAGCAAATGTTAATATGAATATGAGTGTGGAAGAATGTAAACAAGAGTGCTTGAGAAACTGTTCTTGTAATGCCTATGCAGCTGCAGATGTGAGAAATGGAGGAAGTGGGTGCTTAGCTTGGCATGGGACTTTGACGGACACAATGGTTTTAAGTGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCACTGAACTTGCAAAATATGCTAGGAAATCAAAAGGAGAGCTTTCCAAGTTTGGGAAAGTGGGAATAGCAATGGCTTGTGTCGCTTTGATTGCTCTTCTCACCACCTTATCTGTATATTGCATTCGGAAGAGAAAAACAAGAGATGAAATTGGAGAGCAAGAATTAGAGTTAGATTCCCCAACGAATCAAGAACGATATGGTGAAGATGGAGGACAATCAAGCTTAACATTTTTCAGCATCAAAACCATAATGACTGCAACAAACAATTTCTCAAATGAGAATCAACTAGGGCAGGGTGGATTTGGTTCTGTATACAAGGGCTTACTAGATAATGGACTAGATATAGCAGTGAAAAGATTGTCACAAGGTTCTGGACAAGGGATTGGAGAGTTCAAGAATGAAATTAGATTAATTGCAATGCTGCAACATAGGAATCTTGTTAAGTTGCTTGGGTATTGCATTCATAAGGAAGAAAGGATGTTGATATATGAATACCTACCCAACAAAAGCTTGGACTTCTTTCTCTTTGATTTTGGCATGGCTAGAATATTTGGTGAGGATCAAGTCCAAGCAAAAACTCGACGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGGCAGGACAATATTCAACAAAGTCTGATGTTTTTAGCTTTGGTGTTCTTTTGCTGGAGATTATCAGTGGCAAGAGAAATACCTATGGTGATAAAGAAAGATCATCCCTAAATTTGATTGGGCAGGTGTGGGACTTATGGGGAGAAGGAAAAGCCTTGGACATAATGGACTCAACACTTGGCAAATCATATCCTCTTGACACATCCCTAAGGTGTATACAAATTGGGCTCTTGTGTGTGCAAGAAAGTGCCTTCTATAGACCATCCATGTTAGACGTCATTTTCATGCTTGGCAATGAAGTAAGCATACCGTCACCTCACAAGCCTGCTTTCCTATTCAATTATGAAATAAAGCATTTAGAGTCTTCATCATCGGGAGATCCTTCAATAAACGTTATGACTACTTCAATCGATGCTCGGTAA 2433 0.4048 MLHFINHRWSPEPNLQQHWWFLVKLGVDQVPGQLIMAAKELLTLFVIIHHCFLFCAATDIITTDKPLSDGDILISKENKFALGFFAPGKSNYRYVGIWYYNLQQQTVVWVSNRDNPMNDTSGVLSISSNGNLVLHGNYSDMPLWSTNASVTVPNTEVMVQLTDLGNLVLIQNDSKTIIWQSFDHPTDTLLPYARIGVNKRTGQSEFLQSWKTEDDPGTGSFSVGFNTSGKSQLFLYNNNAPWWRIGSFNGEMYVGNPFMKQAMASDFNMTILDDDNEVAFRYNAFDKTIIVRAVALQSGSFQVLIWDSNKIQWNRYWYGPKVDCDMYGSCGANGNCDSYDYAYFKCFCLPGFEPKNPTDWYQHFHRTEGCVRKKGPSVCGNNGEGFVRVERVKIPDTSLANVNMNMSVEECKQECLRNCSCNAYAAADVRNGGSGCLAWHGTLTDTMVLSDEGHDLYVRVDATELAKYARKSKGELSKFGKVGIAMACVALIALLTTLSVYCIRKRKTRDEIGEQELELDSPTNQERYGEDGGQSSLTFFSIKTIMTATNNFSNENQLGQGGFGSVYKGLLDNGLDIAVKRLSQGSGQGIGEFKNEIRLIAMLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLDFFLFDFGMARIFGEDQVQAKTRRIVGTYGYMSPEYAMAGQYSTKSDVFSFGVLLLEIISGKRNTYGDKERSSLNLIGQVWDLWGEGKALDIMDSTLGKSYPLDTSLRCIQIGLLCVQESAFYRPSMLDVIFMLGNEVSIPSPHKPAFLFNYEIKHLESSSSGDPSINVMTTSIDAR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2404g00006 810 CDD PAN_AP_plant 379 460 - -
Pral2404g00006 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 54 182 - -
Pral2404g00006 810 Gene3D Hepatocyte Growth Factor 377 457 - -
Pral2404g00006 810 Gene3D - 53 183 IPR036426 -
Pral2404g00006 810 ProSiteProfiles Protein kinase domain profile. 552 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00006 810 Pfam S-locus glycoprotein domain 243 356 IPR000858 GO:0048544
Pral2404g00006 810 SMART ntp_6 381 460 IPR003609 -
Pral2404g00006 810 SUPERFAMILY Protein kinase-like (PK-like) 535 786 IPR011009 -
Pral2404g00006 810 Pfam D-mannose binding lectin 106 211 IPR001480 -
Pral2404g00006 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 216 IPR036426 -
Pral2404g00006 810 Gene3D Phosphorylase Kinase; domain 1 520 622 - -
Pral2404g00006 810 CDD B_lectin 64 185 IPR001480 -
Pral2404g00006 810 PIRSF SRK 32 639 IPR024171 GO:0004674
Pral2404g00006 810 PIRSF SRK 639 810 IPR024171 GO:0004674
Pral2404g00006 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 44 759 - -
Pral2404g00006 810 Gene3D Transferase(Phosphotransferase) domain 1 623 765 - -
Pral2404g00006 810 ProSitePatterns Protein kinases ATP-binding region signature. 558 580 IPR017441 GO:0005524
Pral2404g00006 810 ProSiteProfiles Bulb-type lectin domain profile. 58 182 IPR001480 -
Pral2404g00006 810 ProSiteProfiles PAN/Apple domain profile. 379 461 IPR003609 -
Pral2404g00006 810 Pfam PAN-like domain 379 445 IPR003609 -
Pral2404g00006 810 SMART blect_4 64 185 IPR001480 -
Pral2404g00006 810 Pfam Protein tyrosine and serine/threonine kinase 555 637 IPR001245 GO:0004672|GO:0006468
Pral2404g00006 810 Pfam Protein tyrosine and serine/threonine kinase 639 704 IPR001245 GO:0004672|GO:0006468
Pral2404g00006 810 ProSiteProfiles EGF-like domain profile. 320 358 IPR000742 -
Pral2404g00006 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2404g00006 Pral-Chr2404 81708 86630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2404g00006 482 782 Receptor kinase-like Gene Family AT4G23190 41.274 9.76e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2404g00006 PK_Tyr_Ser-Thr 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2404g00006 - - pcin:129286378 1164.44