Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2404g00001 ATGGGAGGTTTTCTTGGCTACCTCCATGTTAACTTCTTCTCGAGCTGTGCTGTTATCCTCTCTTTATTTTCTGGAATTTCATTCTCTAGCGATACCTTAAATTCAACCCAATCACTAGGGATTAACCAAACCCTTGTATCTTCCAATCAAGTGTTTGAATTAGGGTTCTTCAATTCAACTTCTTCTTCCAGAGGGTACTTGGGAATCTGGTACAAGAACATTCCTGAGAGAACAATCGTCTGGGTTGCAAACAGAGACACCCCACTTGAAAATTCCAATGCAACTCTGAAAATCGGAGACAGAGCAAACCTGGTTCTTCTCGATCCAGCAGGAAATTCCTTATGGTCCTCGAATCAATCAGAATCTGCACCTTCAAATCCTGTGCTCAAGCTTCTGGATTCTGGGAATCTGGTAATTAAAGAAGCAAGTGAAACTGATGACTCCGACAACTTTCCCTGGCAAAGCTTTGGTTTTCCCACAGACACTTTGTTACCAGGTATGAAGCTGGGATGGGACTTTGGTAAAGGCATTGAATGGCGTATAACATCATGGAAAAGCGAAAACGACCCTTCAAGTGGAGATTATTCTTTCAGAATGGAACGCCAAGGAATCCCAGAAGCTTTTTTGTATGATAAAGGGGACAAAACATTTAGAACAGGACCATGGAATGGTATAAGATTCGGTGGATTGCCAGTACTCACATCAGAAGCTGTTGTTCAAGATACTTTGGTTCAAAATTCAGACGAGGTGTACTACACACCCTCTTCGGTTTTAACCGGTAACCAATCTGTTCTTACAAGGCTTGTTATAAATTGGACTGGTGATGTTCAAAGATTTGTAAGAGCACAAGGAAGCCAAAGTTGGAACATGATATGGTCTGCACCTCAAGACCGATGCGATAAGTACTTTCAATGTGGTCCATATGGTATATGTGATTCCAATTCTTTTCCTGTATGTAAATGCTTTCAAAGTTTCAGCCCAAAAAATCAGAATGAATGGAATTTGAGAGTTTTTACCGATGGCTGCGCGAGGAGCACAGGTTTGGATTGTCCGACAGACAAGTTCTTGCAGCTGCAGCATGTGGAGTTACCTGAATCAGTGAATGCGTTTGTGAACAATAGCATGTCCCTTTCAGAATGTGAGGACATGTGCAGGAAAAATTGTTCTTGTAGTGCTTATGCTAATGTGAACGTCATTAATGGAGGAACAGGTTGTGTTATATGGACTGAGGACCCGAAAGACATGAGGCAGTTTTCTGAAGGTGGCCAAGATGTCTTTGTCAGAGTTGCTGCTTCTGTTGTTACTGACCCAGGATCTGCAAGTGGCAAGAAGAAAAATACAGGCATGATTATAGGCATTACAATGGGAGCAATTATCATAGTTTTGGGTTTGATCATGTTTCTTTTGTGGAAGAGAAAGTCAAATATACTAAAACGAAGAGCAGAGCAGATAGGTGGTTTTGGGACAAGTCAAGATATACTTTTAGTCTCAAGAAATACAGAAAATTCAGGTGATACGAACATGGATGATCTAGAGTTGCCATTGTTTGATTTTAATACCATAACACTGGCTACAGACAACTTCTCAGGGGCAAATAAACTTGGAGAAGGAGGCTTTGGTAGTGTTTACAGGGGTAGGTTGTTTGAAGGGCATGATATTGCTGTGAAGAGGTTATCAAAAGCCTCAGGGCAAGGGATCGAAGAATTCAAGAATGAAGTCAAGTTGATTGTGAAGCTTCAACATCGAAACCTTGTACGAATGTTTGGTTGCTGCATTGAGAACGAGGAAAAGATGTTAGTTTATGAATATATGGAAAATAAAAGCCTTGATTTTTTCTTGTTTGACAGAGAAAAATGTTCCTTATTGGACTGGCAATTACGCTTCGACATTATATGTGGAATAGCAAGAGGACTTCTTTATCTTCACCAGGACTCTAGACTTAGAATTATTCATAGAGATCTCAAGGCAAGTAACATTCTACTTGACAAGGAGATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATCTTTGGTAATGATCAAACAGTAGCGAAAACAATAAGAGTTGTTGGAACATATGGTTATATGTCTCCAGAATATGCATTGGATGGACTTTTTTCTATAAAATCCGATGTTTTTAGCTTTGGAGTTCTTGTGTTAGAAATAATAAGCGGCAAGAAGAACAGAGGATTTTATTACTCAGACGAGTTAAACCTCCTTGGACATTCATGGAAGCTATGGAATGAAGGGCGCGCACTGGAACTGGTGGATCCATCATTTGGTAATTCATATTCATCATCTGAAGCATTAAGATGCATAAAGGTTGGTTTAATCTGTGTTCAAGAAAGACCAGAAGATCGACCAACAATGTCTTCTGTAGTATTAATGTTAAGTAGTGAAAATGCATCAATACCACAGCCTAAGAACCCAGGTTTTGTTGCAAGGACTCATACTGATACTAGTTCTTCAACCCAACAAGAAGAATCATACTCTGTGAATCAAGTTACAGTCACAGTAGTTGATGCCAGGTAG 2535 0.3984 MGGFLGYLHVNFFSSCAVILSLFSGISFSSDTLNSTQSLGINQTLVSSNQVFELGFFNSTSSSRGYLGIWYKNIPERTIVWVANRDTPLENSNATLKIGDRANLVLLDPAGNSLWSSNQSESAPSNPVLKLLDSGNLVIKEASETDDSDNFPWQSFGFPTDTLLPGMKLGWDFGKGIEWRITSWKSENDPSSGDYSFRMERQGIPEAFLYDKGDKTFRTGPWNGIRFGGLPVLTSEAVVQDTLVQNSDEVYYTPSSVLTGNQSVLTRLVINWTGDVQRFVRAQGSQSWNMIWSAPQDRCDKYFQCGPYGICDSNSFPVCKCFQSFSPKNQNEWNLRVFTDGCARSTGLDCPTDKFLQLQHVELPESVNAFVNNSMSLSECEDMCRKNCSCSAYANVNVINGGTGCVIWTEDPKDMRQFSEGGQDVFVRVAASVVTDPGSASGKKKNTGMIIGITMGAIIIVLGLIMFLLWKRKSNILKRRAEQIGGFGTSQDILLVSRNTENSGDTNMDDLELPLFDFNTITLATDNFSGANKLGEGGFGSVYRGRLFEGHDIAVKRLSKASGQGIEEFKNEVKLIVKLQHRNLVRMFGCCIENEEKMLVYEYMENKSLDFFLFDREKCSLLDWQLRFDIICGIARGLLYLHQDSRLRIIHRDLKASNILLDKEMNPKISDFGMARIFGNDQTVAKTIRVVGTYGYMSPEYALDGLFSIKSDVFSFGVLVLEIISGKKNRGFYYSDELNLLGHSWKLWNEGRALELVDPSFGNSYSSSEALRCIKVGLICVQERPEDRPTMSSVVLMLSSENASIPQPKNPGFVARTHTDTSSSTQQEESYSVNQVTVTVVDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2404g00001 844 ProSiteProfiles Protein kinase domain profile. 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00001 844 Pfam PAN-like domain 351 414 IPR003609 -
Pral2404g00001 844 ProSiteProfiles PAN/Apple domain profile. 350 430 IPR003609 -
Pral2404g00001 844 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Pral2404g00001 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 190 IPR036426 -
Pral2404g00001 844 Gene3D Transferase(Phosphotransferase) domain 1 604 810 - -
Pral2404g00001 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 785 - -
Pral2404g00001 844 MobiDBLite consensus disorder prediction 814 833 - -
Pral2404g00001 844 SMART blect_4 36 159 IPR001480 -
Pral2404g00001 844 MobiDBLite consensus disorder prediction 806 833 - -
Pral2404g00001 844 Pfam D-mannose binding lectin 78 185 IPR001480 -
Pral2404g00001 844 PIRSF SRK 4 844 IPR024171 GO:0004674
Pral2404g00001 844 CDD STKc_IRAK 534 798 - -
Pral2404g00001 844 Pfam Domain of unknown function (DUF3403) 800 844 IPR021820 GO:0004674
Pral2404g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 603 - -
Pral2404g00001 844 Gene3D - 25 157 IPR036426 -
Pral2404g00001 844 CDD B_lectin 36 159 IPR001480 -
Pral2404g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 806 - -
Pral2404g00001 844 SUPERFAMILY Protein kinase-like (PK-like) 507 798 IPR011009 -
Pral2404g00001 844 CDD PAN_AP_plant 348 430 - -
Pral2404g00001 844 SMART ntp_6 350 429 IPR003609 -
Pral2404g00001 844 Pfam S-locus glycoprotein domain 217 329 IPR000858 GO:0048544
Pral2404g00001 844 Gene3D Phosphorylase Kinase; domain 1 503 603 - -
Pral2404g00001 844 Pfam Protein tyrosine and serine/threonine kinase 532 796 IPR001245 GO:0004672|GO:0006468
Pral2404g00001 844 SMART serkin_6 528 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2404g00001 844 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Pral2404g00001 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 156 - -
Pral2404g00001 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2404g00001 Pral-Chr2404 13242 16764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2404g00001 436 818 Receptor kinase-like Gene Family AT4G23190 52.442 1.36e-139 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2404g00001 PK_Tyr_Ser-Thr 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2404g00001 - - aip:107621503 1129.78