Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2402g00003 ATGGGAATTTACCTCAGCGCCCCGAAAACAGATAAGGCTTCTGATGATGGTGAGAATGACAGGCTTCGCTACGGTTTGTCTTCCATGCAGGGTTGGCGTGCTACCATGGAAGATGCTCATGCAGCCCATCTAAATTTGGACGAATCAACATCTTTCTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTGCTTAAGAATGAAGCTTATGTAGCTGGAGATATAGGCACATCTTTGCAGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAGTTAGCTGTCTTGGGAGATAATATAGAAAAGTTGTCTGGTATGCTAGAGGGCTTTATATGGTCTCCAAGGGGCGGTGACGGCAATGACCATTCTGATGACTGGGTTCTTGAGGAGGGACCGCATTCTGATTTTACGGGACCAAGCTCTGGATGCACAGCTTGTGTGGCAGTCATTCAAGGCAACCAACTTGTAGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCCCATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGATAGGATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTGGCCAGAGCAATTGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTCACTGCTGATCCGGATATTACTTCTGTTGAGCTTTGCGATGATGATGAGTTTCTTGTGATAGCGTGTGATGGGATATGGTAA 828 0.4481 MGIYLSAPKTDKASDDGENDRLRYGLSSMQGWRATMEDAHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYVAGDIGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGDGNDHSDDWVLEEGPHSDFTGPSSGCTACVAVIQGNQLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIW 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2402g00003 275 Gene3D - 1 275 IPR036457 -
Pral2402g00003 275 PANTHER PROTEIN PHOSPHATASE 2C 20 275 IPR015655 GO:0004722|GO:0006470
Pral2402g00003 275 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pral2402g00003 275 CDD PP2Cc 23 275 IPR001932 -
Pral2402g00003 275 ProSiteProfiles PPM-type phosphatase domain profile. 23 275 IPR001932 -
Pral2402g00003 275 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pral2402g00003 275 Pfam Protein phosphatase 2C 155 275 IPR001932 -
Pral2402g00003 275 SUPERFAMILY PP2C-like 3 275 IPR036457 -
Pral2402g00003 275 SMART PP2C_4 13 275 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2402g00003 Pral-Chr2402 12863 20183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2402g00003 1 275 PP2C-type Phosphatase Gene Family AT2G25070 77.818 4.38e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2402g00003 K17499 - gmx:100499713 508.834