Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2402g00001 ATGGGAATTTACCTCAGCGCCCCGAAAACAGATAAGGCTTCTGATGATGGTGAGAATGACAGGCTTCGCTACGGTTTGTCTTCCATGCAGGGTTGGCGTGCTACCATGGAAGATGCTCATGCAGCCCATCTAAATTTGGACGAATCAACATCTTTCTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTGCTTAAGAATGAAGCTTATGTAGCTGGAGATATAGGCACATCTTTGCAGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAGTTAGCTGTCTTGGGAGATAATATAGAAAAGTTGTCTGGTATGCTAGAGGGCTTTATATGGTCTCCAAGGGGCGGTGACGGCAATGACCATTCTGATGACTGGGTTCTTGAGGAGGGACCGCATTCTGATTTTACGGGACCAAGCTCTGGATGCACAGCTTGTGTGGCAGTCATTCAAGGCAACCAACTTGTAGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCCCATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGATAGGATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTGGCCAGAGCAATTGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTCACTGCTGATCCGGATATTACTTCTGTTGAGCTTTGCGATGATGATGAGTTTCTTGTGATAGCGTGTGATGGGATATGGGATTGCATGTCAAGCCAACAGCTTGTGGATTTTATACATTTACAGCTGCAGACGGAGAATAAACTCTCTGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCGCCTACGGCTGGTGGCGAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAGCCTTCGAGTCCAGATGACCCGGTTACAGACAACCCTCCATCATCTGCTCAACTATGCAAGGCTGATGAGAGTCTAAATCAACCATCTAATGGTGAAAGAAGTTTAGACCAACCAATCTAG 1107 0.4499 MGIYLSAPKTDKASDDGENDRLRYGLSSMQGWRATMEDAHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYVAGDIGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGDGNDHSDDWVLEEGPHSDFTGPSSGCTACVAVIQGNQLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHLQLQTENKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKPSSPDDPVTDNPPSSAQLCKADESLNQPSNGERSLDQPI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2402g00001 368 Gene3D - 1 329 IPR036457 -
Pral2402g00001 368 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Pral2402g00001 368 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pral2402g00001 368 CDD PP2Cc 23 328 IPR001932 -
Pral2402g00001 368 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pral2402g00001 368 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Pral2402g00001 368 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Pral2402g00001 368 MobiDBLite consensus disorder prediction 338 368 - -
Pral2402g00001 368 PANTHER PROTEIN PHOSPHATASE 2C 20 327 IPR015655 GO:0004722|GO:0006470
Pral2402g00001 368 MobiDBLite consensus disorder prediction 329 368 - -
Pral2402g00001 368 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2402g00001 Pral-Chr2402 12863 21383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2402g00001 1 333 PP2C-type Phosphatase Gene Family AT2G25070 77.545 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2402g00001 K17499 - gmx:100499713 624.78