Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2401g00003 ATGGCTGTCTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTTACAGAGGCAGAGTCCGCCCTCAAAGAGGACGTCATAGAAAAGGGTGATACCGGCTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGTACCGCCGCCTCCTCCGGTCAGAGTCCGATCATTTTCCGGATGTTCGGAAAGGCAATATGGCAGAGATTGCTCGAAATCAAGCTCTAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGCTCATCTACCTCGGGTGCTTGTTCTTCAGAATTCATCAATCCATATGGAATTCGATCCTCATCCCAAACTCGTAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAGTTCGGCACAGCACGTGATTACCATGACTTTGACATGCAAAATGAACCGTATTGGTATAATGAGAAAGATGATGACGATTTCATGTCCCCCAGTTTTGATGGGCCAGAATTCTTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAATGGAGAATCAACATGAAAATCACCTGGAAAATAATTACAAAAGTGAAGTATTCCAAGTGGAGGGAAATGGTGATTGCATGGACAAACTATGCCTATATAATCATTCTGATGTAGGAAATGAAAATGTGACTTGTTTACAAGACTTTTGTCATATTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTGGAGAGGTCGAGAATCCTACTTTTGTCTATAACTGTGAAGTTCCATTTGGCAAGCGCTCTGCGGGCTCAGGAGAGCCTTGTAATGAAGATCCTAGTAACGACCGCTGCCCAAGTTTAAAGGAAATTCATCCGAATAATTTGCATTTAAAGTTTGTTGGGGATAGTTCCTCTACGGATTCTGTTCCAGAGCATTCTATGGATGAAACTTCTGACCTCTGTCCTAAAAGTAACAGCAATAAGGTGTACAAAGCTCCCTATGACTTAACTATTGAAATTGCTGAAACAGATCTGCCAAATGGACTGGCCAGGTGTAAAGCTCAAGATTGTGGAGAATTCACTGAAGAATGCCAAGATCCAGAAAATGCAGCAGATGGAGAAGATGTTACTGATGATGAGCTTTTAAAGTACGCTCACGAGGATGAATATGAGGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACCGGATTTGAAGAAAGCAAAGATCTACCCATTATGCTGAATACAGTCATAGGCGGCAGGTACTATGTGACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTAGATGAAATTAAACTTCTAAAGCTTGTGAACAAGAATGACCCAGCTGATGAGCACCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAGGCATATTTTACGCTGAATAGGTTGCAGGTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGCGATCTAAAGCCAGAAAATATTCTCATTAAAAGTTATAGAAGATGTGAGATTAAAGTCATTGATCTAGGAAGCAGTTGCTTTCAATCAGACAATTTATGCCTATATGTGCAGTCGCGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATATTGGCTGAGCTATGCTCTGGTGCTCTTTCCAAATGA 1854 0.4126 MAVSDVGAVLEFLRNNGFTEAESALKEDVIEKGDTGSFDYEKFFFPMVPPPPPVRVRSFSGCSERQYGRDCSKSSSKSSDDEFVSLGSSTSGACSSEFINPYGIRSSSQTRKDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDDFMSPSFDGPEFFGCQSEDKFIMTSEMENQHENHLENNYKSEVFQVEGNGDCMDKLCLYNHSDVGNENVTCLQDFCHIDKKEQLEGGLVGEVENPTFVYNCEVPFGKRSAGSGEPCNEDPSNDRCPSLKEIHPNNLHLKFVGDSSSTDSVPEHSMDETSDLCPKSNSNKVYKAPYDLTIEIAETDLPNGLARCKAQDCGEFTEECQDPENAADGEDVTDDELLKYAHEDEYEVFDLRIIHRKNRTGFEESKDLPIMLNTVIGGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQVITRQCLEALQYLHSLGIIHCDLKPENILIKSYRRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGALSK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2401g00003 617 ProSiteProfiles Protein kinase domain profile. 413 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2401g00003 617 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Pral2401g00003 617 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Pral2401g00003 617 Gene3D Transferase(Phosphotransferase) domain 1 467 613 - -
Pral2401g00003 617 SUPERFAMILY Protein kinase-like (PK-like) 403 614 IPR011009 -
Pral2401g00003 617 SMART serkin_6 413 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2401g00003 617 MobiDBLite consensus disorder prediction 291 310 - -
Pral2401g00003 617 Pfam Protein kinase domain 415 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2401g00003 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Pral2401g00003 617 CDD PKc_DYRK_like 413 613 - -
Pral2401g00003 617 PANTHER DUAL SPECIFICITY PROTEIN KINASE 108 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2401g00003 Pral-Chr2401 10583 14359 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2401g00003 410 613 MAP Kinase Gene Family AT5G19010 34.234 3.95e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral2401g00003 Pkinase 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2401g00003 - - gmx:100795722 878.241