Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral239g00010 ATGGCTGAATTCACAACAGATTTTCAAAGTTTTAGACCCTCCTTTCCTTTCTTAGACGTTGATCCAAACTTGGAACTTATAAACCAGTTCACAGGCATGATGAGCCCCCTTGTCCTGGACAACTCTAATCTCAATGTCCAGAGCTTGATTCCCTTCTCTCAAGAACCTGATTTTCCAGAAAATTTCCCCGTTTTACCGGCAGAAAATGAAATCCAGGATAGTCAAAAGAGGAAAGCGATGGATGTTACGGAAACCAGTTCTAGTTCTGGAAGAGGTAAGAGAACAAAGAGCAATGTAGCAGAAGAAGGTAAACCAAAGGAAGTGGTTCATGTCAGGGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGGAAAATCAACGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATGCTACAAGACCATGGGTATGGCGGTGATGTTGGACGAGATTATAAACTATGTCCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGCTGACTGCGGCAAGCACCTTCTACGATTTCAATTCAGAGACAGACGCTATAGAAGCAATGCAGAGAGCAAGGGCATTCAAGGCAAAAGGATTATCCTCAAGAAATGATAGTGAAGAAGGATATGGCGGAGGGGTTTCTTGCTTTCATCCAACTTGGCCTCTCTAG 696 0.4411 MAEFTTDFQSFRPSFPFLDVDPNLELINQFTGMMSPLVLDNSNLNVQSLIPFSQEPDFPENFPVLPAENEIQDSQKRKAMDVTETSSSSGRGKRTKSNVAEEGKPKEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDAIEAMQRARAFKAKGLSSRNDSEEGYGGGVSCFHPTWPL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral239g00010 231 CDD bHLH_AtBPE_like 107 192 - -
Pral239g00010 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 185 IPR036638 GO:0046983
Pral239g00010 231 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 167 IPR011598 GO:0046983
Pral239g00010 231 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 191 IPR024097 GO:0006355
Pral239g00010 231 SMART finulus 123 173 IPR011598 GO:0046983
Pral239g00010 231 MobiDBLite consensus disorder prediction 71 106 - -
Pral239g00010 231 Gene3D - 114 185 IPR036638 GO:0046983
Pral239g00010 231 Pfam Helix-loop-helix DNA-binding domain 121 168 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral239g00010 Pral-Chr239 52201 53695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral239g00010 1 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 44.444 1.61e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral239g00010 HLH 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral239g00010 - - qsa:O6P43_005099 287.345