Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2397g00001 ATGGCCGCGCCGAAGCCACGCAACACTCGATCAACGTCTCTCAGGGACGCCTCTGACTCCTCCAAGATGGAGGGCACGGGTACATGGGATGCCCTCCAATGGACCAAGTTTCAGCCTGGTTCACGCAACGTTTCGCATGCCAATTTAGATTTCTTGCTGGAGGAAGAAAACATCATAGCCCAGGGACATGGCGTTGTTCTTATTAATTCAGATGATGCAGGCACATTGGTGGTCACAAATTTTCGTCTTGTTTTTCTGAGTGATCGAACTAGAAATATTATTGCCCTTGGAACGATTGCACTTGCAACAATTGAGAAGTTTAACAAGATAGCTGTAAAGATGCAGTCAGCCAATCGTCAATTAGACAAGACACCCCCACAAAGACTGCTCCAGGTTATTGGAAAAGATATGAGAATTATCGTTTTTGGTTTCAGGCCTCGTACAAAGCAGAGGCGTGTCATATTTGATGCCTTACTAAGAAGTACAAAGCCAGCTGTACTATGGGATCTTTATGCATTTATATGTGGACCTTCTAAGTTTACTAACTCTAACCCAAAGGTGCGCCTACTAGATGAGTATTTCCGGCTTCTTGGAAAACGCTTTTACCGTGCTTCAAGCAATATGATTGAAAGTGGATCCTTTACCTTGTCAAATGACTTGTGGAGAATAAGTAAAGTGAACTCTAACTACAACGTGTGCCAGAGTTATCCTTTCGCTTTGATTGTACCAAAGACCATAAGTGATGATGAAGTGCAACAAGCTTCCAGCTTTCGTGGTAGATGTCGGGTTCCTGTAGTTTCATGGTGCCACCCAGATACGGGAGCGGTTCTTGCACGTTCATCCCAACCTTTAGTTGGCCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTCGTCGCTGGATTATGTGGCAAACTTTATGATGGCTCGCGCAGGAAGCTTTATATTGCTGATGCAAGACCGAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCGGAATCATCTTCAAATTACTTTCAGTGTGAGGTAGTTTTTTTTGGTATAGACAACATCCATGCAATGAGAGAAAGCTTTGCTCGGCTAAGAGAATACCTAGACACTCATGGCAAATCATCATCAGATGGAATGTCATCTTTCTTGAGACATGGTGGGTCAACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACTTCAGTATCTACTCTTGGGGACAGTGGATGGCTACTACACGTTCAAAGTGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTCATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAATTGGTTTCTCTTGCTGATTTGTTACTTGATCCCTACTATCGCACATTCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCACCCATTTTCAGATCGTATGGGAACGCCCTCAGTCTCTGGAAGTGGCAGCATGCCTTTTGAGTTGACTAGACAGTCTTCTACTGGAACTTGCCCTTCACCACCCATGCGCCAGTCATCATTCACATCTCAGTCATCCGCCTCTCATGCACAGACTTCAAACCACTACTCTCCCATTTTTTTGCAG 1626 0.4477 MAAPKPRNTRSTSLRDASDSSKMEGTGTWDALQWTKFQPGSRNVSHANLDFLLEEENIIAQGHGVVLINSDDAGTLVVTNFRLVFLSDRTRNIIALGTIALATIEKFNKIAVKMQSANRQLDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRSTKPAVLWDLYAFICGPSKFTNSNPKVRLLDEYFRLLGKRFYRASSNMIESGSFTLSNDLWRISKVNSNYNVCQSYPFALIVPKTISDDEVQQASSFRGRCRVPVVSWCHPDTGAVLARSSQPLVGLMMNMRSNADEKLVAGLCGKLYDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEVVFFGIDNIHAMRESFARLREYLDTHGKSSSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQSVLAGAAWIAARLHMEKASVLVHCSDGWDRTSQLVSLADLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRMGTPSVSGSGSMPFELTRQSSTGTCPSPPMRQSSFTSQSSASHAQTSNHYSPIFLQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2397g00001 542 Gene3D - 63 162 IPR011993 -
Pral2397g00001 542 MobiDBLite consensus disorder prediction 490 542 - -
Pral2397g00001 542 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Pral2397g00001 542 PANTHER MYOTUBULARIN-RELATED 43 542 IPR030564 -
Pral2397g00001 542 Pfam Myotubularin-like phosphatase domain 171 542 IPR010569 -
Pral2397g00001 542 CDD PTP-MTM-like 261 542 - -
Pral2397g00001 542 SUPERFAMILY PH domain-like 52 175 - -
Pral2397g00001 542 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 213 542 IPR029021 -
Pral2397g00001 542 MobiDBLite consensus disorder prediction 1 25 - -
Pral2397g00001 542 ProSiteProfiles Myotubularin phosphatase domain. 198 542 IPR010569 -
Pral2397g00001 542 SMART gram2001c 49 111 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2397g00001 Pral-Chr2397 577 11104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2397g00001 1 542 Protein tyrosine phosphatase (PTP) family AT3G10550 70.275 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2397g00001 K18081 - gmx:100781842 855.129