Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2396g00002 ATGGAGGACAGAGTAGTGAACACAATCGCTGTAATATCGGTGATTTTTCTGATCACTTTTGTCGTCATCGCTCGCGTCTTCTTAAACCGTTCAAAAGCCTTCTTCCTCATCTTGGGGGCCGATGTTGCCGTGATCATCGCAATCTTCGCCTTCGTTCTCATCCGAAGGCGATTCAACCGTAGAAGAAGATTGATCGAGTCCCGATTAAAATCTGAAGGTAGCGAGCTCCGAATAGAATACAGCTTCTTACGAAAAGTTGCCGGCGTTCCGACCAAATTTCGATTCCAGGAGCTCGAAGATGCCACCGGCGGATTCCAGTGTCTACTCGGCCAAGGCGCCTCTGCTTCGGTCTTCAAAGGCATTTTAAACGATGGCACGTTGGTCGCGGTGAAGCGAATCAACGGCGAAGAACGAGGCAAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGCGTCCAGCACGTCAACCTCGTGCGCCTGATCGGATCAAGAATCCTCCACCTGGACATAAAACCAGAAAACATTCTGCTAGACGAGAATTTCAAAGCAATCGTCGCAGACTTAGGTCTCTCGAAGCTAATGGGGAAAGACGAAAGCCAAGTGATGACCACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTCTTAGAACATGGAGTTTCAGAGAAAACAGACATATACAGTTACGGTATGGTCCTATTAGAGATCGTAGGAGGAAGAAGAAACGTGTGTTTGATCCAAGATCCGAGGGACAAGGAGAAGAAGAAGTGGGAATACTTTCCCAGGATTGTGAACGAGAAAGTGAGAGAAAACAAGTTGATGGAAATTGTGGATGAGAGATTGATGGAAGGTGGGGGAGTGGAAGAGAGGGAAGTGAAGAGGATGGTGTATGTGGCATTGTGGTGCATCCAAGAGAGGCCAAGGGTGAGGCCAAATATGAAACAAGTGGTGGAGATGCTTGAAGGTAGAGTAATGGTGGATCAGCCGCCTGATACGAGAATGGTTATGGGAAATTTCTTTTCAATGGAAGGAGGAGAAGAAGATGAAGCAGAAAGTTCCCAGACCGTCACAAGTTTGGCTGCTTATTTGGCCAGCCAAAGGGCAACAGGAAATTTGGACTATGTATCCACTTACTCCATGGCCACCACGGTTCTATCTGGTAGATAG 1176 0.477 MEDRVVNTIAVISVIFLITFVVIARVFLNRSKAFFLILGADVAVIIAIFAFVLIRRRFNRRRRLIESRLKSEGSELRIEYSFLRKVAGVPTKFRFQELEDATGGFQCLLGQGASASVFKGILNDGTLVAVKRINGEERGKKEFKSEVAAIASVQHVNLVRLIGSRILHLDIKPENILLDENFKAIVADLGLSKLMGKDESQVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIVGGRRNVCLIQDPRDKEKKKWEYFPRIVNEKVRENKLMEIVDERLMEGGGVEEREVKRMVYVALWCIQERPRVRPNMKQVVEMLEGRVMVDQPPDTRMVMGNFFSMEGGEEDEAESSQTVTSLAAYLASQRATGNLDYVSTYSMATTVLSGR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2396g00002 391 SUPERFAMILY Protein kinase-like (PK-like) 86 324 IPR011009 -
Pral2396g00002 391 PANTHER OS07G0415500 PROTEIN 50 163 - -
Pral2396g00002 391 FunFam Putative receptor-like protein kinase 145 331 - -
Pral2396g00002 391 FunFam Putative receptor-like protein kinase 70 170 - -
Pral2396g00002 391 SMART serkin_6 103 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2396g00002 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pral2396g00002 391 Gene3D Phosphorylase Kinase; domain 1 68 166 - -
Pral2396g00002 391 Gene3D Transferase(Phosphotransferase) domain 1 167 338 - -
Pral2396g00002 391 Pfam Protein tyrosine and serine/threonine kinase 107 163 IPR001245 GO:0004672|GO:0006468
Pral2396g00002 391 Pfam Protein kinase domain 165 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2396g00002 391 ProSiteProfiles Protein kinase domain profile. 12 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2396g00002 391 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2396g00002 Pral-Chr2396 2707 4395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2396g00002 164 335 Receptor kinase-like Gene Family AT5G20050 65.698 1.23e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2396g00002 Pkinase 7.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2396g00002 - - vvi:104880655 381.719