Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2393g00002 ATGGCTCCTACTGCAAAAATTTTTATCGAAGACTTGAACTCCAGCAAAGACACATGGAGTTTGCATGCGAAGATTGTCAGGAAATGGCCGGTGCCCAGAAAGATCCCTCCTTATGCTGTGTGGAAGGTATCCATGCTATTAGTGGATGAACAGGAAAGTAGGATTGAAGCATTTACCACTCAGAAATCACTAATTAGACGTATCATTGAAGAACTTCGGGAGGGGGTAGTGTATCATTTTGAGAACTTTGAAGTGCTCCTTAACAAAGATGAGTACAAGGTTACAGATTGTAAATATAAGTTAAGCTTTCATTGTTCAACATCGATCGAGGAAAGTGATCTTTCAATTCCATTTGATGCATTCAACTTCGTTACAATCAAGGATGTTGCTGAGTTTAATGCCAACAATGAAGACTTGATAGATGTTATTGGGTTTTTACAATCATTTGGAGATTTGAAGGATCATAAAAAAGAAGGGGGTAGTACAAGGAAGCTCAGTTTCACAATTGCGGATGAGAAGTGA 522 0.387 MAPTAKIFIEDLNSSKDTWSLHAKIVRKWPVPRKIPPYAVWKVSMLLVDEQESRIEAFTTQKSLIRRIIEELREGVVYHFENFEVLLNKDEYKVTDCKYKLSFHCSTSIEESDLSIPFDAFNFVTIKDVAEFNANNEDLIDVIGFLQSFGDLKDHKKEGGSTRKLSFTIADEK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2393g00002 173 SUPERFAMILY Nucleic acid-binding proteins 121 172 IPR012340 -
Pral2393g00002 173 CDD RPA1_DBD_A_like 20 109 - -
Pral2393g00002 173 Gene3D - 115 173 IPR012340 -
Pral2393g00002 173 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Pral2393g00002 173 Gene3D - 6 113 IPR012340 -
Pral2393g00002 173 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2393g00002 Pral-Chr2393 19787 20485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2393g00002 1 172 Core DNA Replication Machinery Family AT5G08020 25.140 9.50e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2393g00002 - K07466 pcin:129301944 154.451