Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2391g00001 ATGGCACAACCAGTAGTGTCCTCTTGTATCGATTACAAGTGGGGGTACGATGTGTTCCTTAGTTTCCATGGTGAAGACACTCGCTTAGGTTTCGTTGCCTTTCTTCGAGAGTCTCTACGTCAAAGAGGAATCCATGTCTTTATTGATGATGAGTTCATCAGATCGGGAGAAGAAATCACACCAGCACTTCTCAAAGCCATACAAGAATCCAGGATAGCTATTATAGTTTTCTCCGAGAACTACGCAAACTCCACATTCTGCCTGCAGGAACTTGCGGAGATTCTCGAGTGCTTTAAAGAAGAAGGTCGGTTGATATATCCAGTATTTTATTATGTGGATCCATCTGAGCTGCGACGTCCGAGAGGAAGCTATGCAAAAGCCTTGGCTGCACTGGAGGAAAGGTTTAATGACGACAAAGAAAAAGTACAAAGTTGGAGGTTGGCTTTGTCCCAAGCAGCTAACTTGAAAGGCTGTCATCTCAAACCCAAGATTGCAAATGAACAAGAACATATTACAAAGATTACTGATGAAGTATCAGCGAGGATTAATCGTATTCATAATCATTTACACGTTACTCAATACCCTATTGGACTTGTGTCTCGGGTGAAAGAAGTGGTCTCACATTTAGATCTTTGGTCTACTAAGAAAAATAAAATGGTTGGAATTGTGGGACCTGGTGGGATAGGTAAATCAACGATTGCAAGAGCCTTATATAATTCAATTGCTGATCATTTTGAAGGTTTATGTTTTCTTTCTAATGTAAGGGAAAAGTCTAAAATGCCAAATGGTTTGGCACATCTTCAACAGACATTGCTTTGTAAATTAGTCAAGGAGAAAGATCCTAAAATTGGTGATTTGCATGAAGGAATACCAATAATAAAACAGAGGCTTAGCCAAAAGAAAATTCTTTTGGTCATTGATGACATTGATGAATTGAAAGAGTTAGAAGCTCTAGCTGGAAGTTGTGATTGGTTTGGTCCTGGAAGTAGAATTGTCATAACAACTAGGAATAAACAATTGTTAGCAAGTTCTCAAGTTAAGAGCATTTATAATGTTAGGGAATTAAATGATAAGGAATCTCTTCAATTGCTTTGTTGGCGTGCCTTTAAAAAGGAGAATGTGGAGTGTGATTTCATGGAGGTTTCTAAGCGTGCAATACGTTACTGTTGTGGATTTCCATTAGTTTTAGAAGTGATTGGCTCTCACTTATGTGGTAGAGGAGTTAACGAATGGCACTCTGCATTTGATCAATTTAAAAGAATTCCAGAAGGAAAAGTTTTAGAAGTCCTTAGATTAAGCTATGATGCTTTAGGAGAATTTGAGAAAGAAATTTTCCTGCACTTGGCTTGCTTTTCCAAAGGTGAGGAATTAGGAGAAGTTAAGGCCATGTTGTTATGTTTATATGGGATCCCATTGGCTAATGTTATTAACGTTCTGGTTAATAAATGTCTCATAAAGATTGAAGGAGATCAGGTGCTAATGCATGATGTGATTGAAGATATGGGTAAAGAAATTGTTCGACAAGAATCACCAAATAAACCTGGTGAACGAAGGAACCAATAA 1563 0.3807 MAQPVVSSCIDYKWGYDVFLSFHGEDTRLGFVAFLRESLRQRGIHVFIDDEFIRSGEEITPALLKAIQESRIAIIVFSENYANSTFCLQELAEILECFKEEGRLIYPVFYYVDPSELRRPRGSYAKALAALEERFNDDKEKVQSWRLALSQAANLKGCHLKPKIANEQEHITKITDEVSARINRIHNHLHVTQYPIGLVSRVKEVVSHLDLWSTKKNKMVGIVGPGGIGKSTIARALYNSIADHFEGLCFLSNVREKSKMPNGLAHLQQTLLCKLVKEKDPKIGDLHEGIPIIKQRLSQKKILLVIDDIDELKELEALAGSCDWFGPGSRIVITTRNKQLLASSQVKSIYNVRELNDKESLQLLCWRAFKKENVECDFMEVSKRAIRYCCGFPLVLEVIGSHLCGRGVNEWHSAFDQFKRIPEGKVLEVLRLSYDALGEFEKEIFLHLACFSKGEELGEVKAMLLCLYGIPLANVINVLVNKCLIKIEGDQVLMHDVIEDMGKEIVRQESPNKPGERRNQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2391g00001 520 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Pral2391g00001 520 SMART AAA_5 216 360 IPR003593 GO:0016887
Pral2391g00001 520 SUPERFAMILY "Winged helix" DNA-binding domain 425 510 IPR036390 -
Pral2391g00001 520 Pfam TIR domain 16 181 IPR000157 GO:0007165
Pral2391g00001 520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 518 IPR044974 GO:0006952
Pral2391g00001 520 Gene3D - 185 350 IPR027417 -
Pral2391g00001 520 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral2391g00001 520 Gene3D - 11 184 IPR035897 -
Pral2391g00001 520 PRINTS Disease resistance protein signature 296 310 - -
Pral2391g00001 520 PRINTS Disease resistance protein signature 219 234 - -
Pral2391g00001 520 PRINTS Disease resistance protein signature 389 403 - -
Pral2391g00001 520 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral2391g00001 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 448 IPR027417 -
Pral2391g00001 520 Gene3D - 354 438 IPR042197 -
Pral2391g00001 520 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral2391g00001 520 SMART till_3 15 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2391g00001 Pral-Chr2391 13835 17975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2391g00001 218 510 WRKY Transcription Factor Family AT5G45050 34.014 2.49e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2391g00001 - - pcin:129318502 759.214