Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral238g00003 ATGCCCGTTTTCAGAACACCAACCAGAGACATGGCGAGTTCCATCACCCGAGGCAAATTGATCAGAGACGGACCGGACGGTGACACTCTACTCTCAGATGAACTCAATTTCGAACTAGGATTCTTCAGTTTTGATAACAACAGCTCATTGAGATACGTTGGAATTTGGTACTACAGGATTCCCAGAGCAGAATACATATGGGTTGCCAACAGAGACGAACCCATCAAAGGCAGAGTAGGGGTTATAACAATTGAAAGCGATGGAAATTTGGTCATCTTCGACGGAGATAAGAATCGAGTATGGTCGAGCAACGTACCGGACTCCAAGAATAACACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCCACCACGGATGATGAAAACGAAATATGGAAAAGCTTTGATCATCCAACCGACACGTTTCTTCCTGGTATGACCATACCGGTGGATCCTTCAAAGGGTGAGATTCGATCTTTCGTGTCATGGAAATCTCGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATTGACCCGCGAGCATCAACCCAGATAGTGATTTGGGAAGGAGAAAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGAAGAATATTCACAGGAGTTTCAAACATGACAGGAAGTTATCTCTATGGATTCAGACTGAACACTGATGAAAATGGAGAAAGGCATTTAGCTTATACCCCACTGAACATCACTGACAAGGTGAGGTTTCAGATAGGTTGGGATGGATTTGAGAGGCAATTCAAATGGAACGAGGGTGAGAAACAGTGGGTAAGAACACAGGAAGAGCCATATAACAAATGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGTTTGGTTTCTCCAATGAAATGTTTTTGCATAAGAGGGTTCGAACCAAAGGAAGTGGATGAGTGGAATAGAGAGAATTGGTCTGGTGGGTGTAAGAGGATGACACCATTGAAGGCTGAGAGGAAAAAGAACAGTAATAATGCTAGTTCTGTTGCTGCAACAGAAGTGGATGTTGAAGAAGATGGTTTCTTGCAGCTGCAATGCAGGAAGTTGCCTGATTTTGCCATCTTGGTGGGTTCTCAGGACAAGAAAGATTGTGAAAGTTATTGCTTGCAGGATACGAATTGTACTGCATATACTTCTGTTAATGGAATTGGATGCCTGATTTGGCATGGCGAGCTGCATGATATTAAGCACTTTGTGGGTGGAGGAGGAAATACACTCTATATTCGCCTTGCTCATTCTGATTTAGGTGATGGCAAGAAGAAAATCAAGATTGTGATAATATTTGCTATCGTGTTGGGGTCAATCTGCGTTGGGATCTCTCTTTGGCTAGTGTGGAGGTTCAAGAGAAGAAAAGTTTCTGCAGTTTCATGCTGTAAAACAAGCGATATTCCAGTTTTTGATACTACAAGAAGCAAGAGCAGACAAGTTTCAGCAGAACTTTCAGGATCAGCTGAACTGAGTTTGGAAGGTCATGAACTAAGTGGACCAGAACTTCCATTATTCAATTTTGATTGTATTGCAATAGCGACAGACAATTTCTCAGAGGAAAATAAGCTTGGGCAAGGAGGATTTGGTCCTGTCTACAAGGGAAAGCTTCGTGGGGGCGAGCAAATAGCTGTCAAGAGGCTTTCAAGAAGATCTGGGCAAGGCCTAGAGGAGTTTAAGAATGAGATGATGTTGATCGCCAAATTACAACATAGAAACCTTGTTAGGCTTTTAGGATGTTCCATTCAAGGGGAAGAGAAGTTGTTGGTATATGAATTTATGCCAAACAAAAGCTTGGATCACTTTTTATTTGATCCTATCAAACAGCAACAACTAAACTGGACTAAGCGCTTTGAAATCATCGAAGGGATTGCAAGAGGGTTGCTTTATTTGCATCGGGATTCAAGACTCCGAATAATTCATCGAGATTTGAAAGCAAGTAATATTCTTTTGGATGAAGATATGAATCCAAAAATTTCAGATTTTGGACTCGCTAGAATATTTGGAGGAGGCCAAAGTGAGGCGAACACTACTAGAGTAGTTGGCACATATGGCTATATGTCCCCGGAGTATGCAATGGAAGGTCTATTCTCAGTTAAATCAGATGTCTATAGTTTTGGTGTATTATTACTTGAGATTGTAAGCGGTCGCAAAAACACTAGCTTTCGTCATTCTGATGACTCAAGTCTCATAGGATACGCTTGGCATCTTTGGAATGATCATAGAGCAATGGAGCTTGTTGATCCTTCGATTTGCGATTCGAGTCAGAAGAACAAGGTTTTGAGATGCATAAACATAGGGATGCTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACAATGTCTTCTGTGGTGTTGATGCTAGAAAGTGAAGCAGCCAATCTTCCTTTGCCAAGACAGCCTTTGCTTACTTCCATGAGAAGACGATCAGAAGACAGAGATTTTTACATGGAAGGTCTTGATGTTTCCTTGAATGAACTTACAGTTACAATGGTGGTAGGAAGATAG 2529 0.4191 MPVFRTPTRDMASSITRGKLIRDGPDGDTLLSDELNFELGFFSFDNNSSLRYVGIWYYRIPRAEYIWVANRDEPIKGRVGVITIESDGNLVIFDGDKNRVWSSNVPDSKNNTEAVLRDDGNLVLSTTDDENEIWKSFDHPTDTFLPGMTIPVDPSKGEIRSFVSWKSRTDPARGNFSMGIDPRASTQIVIWEGEKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNTDENGERHLAYTPLNITDKVRFQIGWDGFERQFKWNEGEKQWVRTQEEPYNKCEIYNKCGSFAECSLVSPMKCFCIRGFEPKEVDEWNRENWSGGCKRMTPLKAERKKNSNNASSVAATEVDVEEDGFLQLQCRKLPDFAILVGSQDKKDCESYCLQDTNCTAYTSVNGIGCLIWHGELHDIKHFVGGGGNTLYIRLAHSDLGDGKKKIKIVIIFAIVLGSICVGISLWLVWRFKRRKVSAVSCCKTSDIPVFDTTRSKSRQVSAELSGSAELSLEGHELSGPELPLFNFDCIAIATDNFSEENKLGQGGFGPVYKGKLRGGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEFMPNKSLDHFLFDPIKQQQLNWTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGGQSEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNDHRAMELVDPSICDSSQKNKVLRCINIGMLCVQDSAAHRPTMSSVVLMLESEAANLPLPRQPLLTSMRRRSEDRDFYMEGLDVSLNELTVTMVVGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral238g00003 842 SUPERFAMILY Protein kinase-like (PK-like) 510 818 IPR011009 -
Pral238g00003 842 Gene3D Phosphorylase Kinase; domain 1 501 600 - -
Pral238g00003 842 Gene3D Transferase(Phosphotransferase) domain 1 601 803 - -
Pral238g00003 842 ProSiteProfiles Bulb-type lectin domain profile. 12 137 IPR001480 -
Pral238g00003 842 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 786 - -
Pral238g00003 842 ProSiteProfiles PAN/Apple domain profile. 348 423 IPR003609 -
Pral238g00003 842 CDD STKc_IRAK 531 796 - -
Pral238g00003 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pral238g00003 842 Pfam PAN-like domain 349 407 IPR003609 -
Pral238g00003 842 SMART ntp_6 348 422 IPR003609 -
Pral238g00003 842 Pfam D-mannose binding lectin 65 166 IPR001480 -
Pral238g00003 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 491 600 - -
Pral238g00003 842 Gene3D - 9 137 IPR036426 -
Pral238g00003 842 CDD B_lectin 26 140 IPR001480 -
Pral238g00003 842 SMART blect_4 21 140 IPR001480 -
Pral238g00003 842 CDD PAN_AP_plant 347 423 - -
Pral238g00003 842 ProSiteProfiles Protein kinase domain profile. 525 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00003 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 803 - -
Pral238g00003 842 Pfam S-locus glycoprotein domain 198 307 IPR000858 GO:0048544
Pral238g00003 842 SMART serkin_6 525 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00003 842 PIRSF SRK 2 842 IPR024171 GO:0004674
Pral238g00003 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 8 137 - -
Pral238g00003 842 Pfam Protein tyrosine and serine/threonine kinase 528 793 IPR001245 GO:0004672|GO:0006468
Pral238g00003 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 171 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral238g00003 Pral-Chr238 29838 33591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral238g00003 499 808 Receptor kinase-like Gene Family AT4G23230 61.736 3.37e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral238g00003 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral238g00003 - - pcin:129285104 1451.03