Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral238g00002 ATGCCCGTTTTCAGAACACCAACCAGAGACATGGGTCTGACACCCAGAACTATACTTTTTCGTCTTCTATTCCCATTCTTCTTCATTCTCTGTGTCCTTACTCTGTTGTCACATGCAGCGAGTTCCATCACCCGAGGCAAATTGATCAGAGACGGACCGGACGGTGACACTCTACTCTCAGATGAACTCAATTTCGAACTAGGATTCTTCAGTTTTGATAACAACAGCTCATTGAGATACGTTGGAATTTGGTACTACAGGATTCCCAGAGCAGAATACATATGGGTTGCCAACAGAGACGAACCCATCAAAGGCAGAGTAGGGGTTATAACAATTGAAAGCGATGGAAATTTGGTCATCTTCGACGGAGATAAGAATCGAGTATGGTCGAGCAACGTACCGGACTCCAAGAATAACACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCCACCACGGATGATGAAAACGAAATATGGAAAAGCTTTGATCATCCAACCGACACGTTTCTTCCTGGTATGACCATACCGGTGGATCCTTCAAAGGGTGAGATTCGATCTTTCGTGTCATGGAAATCTCGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATTGACCCGCGAGCATCAACCCAGATAGTGATTTGGGAAGGAGAAAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGAAGAATATTCACAGGAGTTTCAAACATGACAGGAAGTTATCTCTATGGATTCAGACTGAACACTGATGAAAATGGAGAAAGGCATTTAGCTTATACCCCACTGAACATCACTGACAAGGTGAGGTTTCAGATAGGTTGGGATGGATTTGAGAGGCAATTCAAATGGAACGAGGGTGAGAAACAGTGGGTAAGAACACAGGAAGAGCCATATAACAAATGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGTTTGGTTTCTCCAATGAAATGTTTTTGCATAAGAGGGTTCGAACCAAAGGAAGTGGATGAGTGGAATAGAGAGAATTGGTCTGGTGGGTGTAAGAGGATGACACCATTGAAGGCTGAGAGGAAAAAGAACAGTAATAATGCTAGTTCTGTTGCTGCAACAGAAGTGGATGTTGAAGAAGATGGTTTCTTGCAGCTGCAATGCAGGAAGTTGCCTGATTTTGCCATCTTGGTGGGTTCTCAGGACAAGAAAGATTGTGAAAGTTATTGCTTGCAGGATACGAATTGTACTGCATATACTTCTGTTAATGGAATTGGATGCCTGATTTGGCATGGCGAGCTGCATGATATTAAGCACTTTGTGGGTGGAGGAGGAAATACACTCTATATTCGCCTTGCTCATTCTGATTTAGGTGATGGCAAGAAGAAAATCAAGATTGTGATAATATTTGCTATCGTGTTGGGGTCAATCTGCGTTGGGATCTCTCTTTGGCTAGTGTGGAGGTTCAAGAGAAGAAAAGTTTCTGCAGTTTCATGCTGTAAAACAAGCGATATTCCAGTTTTTGATACTACAAGAAGCAAGAGCAGACAAGTTTCAGCAGAACTTTCAGGATCAGCTGAACTGAGTTTGGAAGGTCATGAACTAAGTGGACCAGAACTTCCATTATTCAATTTTGATTGTATTGCAATAGCGACAGACAATTTCTCAGAGGAAAATAAGCTTGGGCAAGGAGGATTTGGTCCTGTCTACAAGGGAAAGCTTCGTGGGGGCGAGCAAATAGCTGTCAAGAGGCTTTCAAGAAGATCTGGGCAAGGCCTAGAGGAGTTTAAGAATGAGATGATGTTGATCGCCAAATTACAACATAGAAACCTTGTTAGGCTTTTAGGATGTTCCATTCAAGGGGAAGAGAAGTTGTTGGTATATGAATTTATGCCAAACAAAAGCTTGGATCACTTTTTATTTGATCCTATCAAACAGCAACAACTAAACTGGACTAAGCGCTTTGAAATCATCGAAGGGATTGCAAGAGGGTTGCTTTATTTGCATCGGGATTCAAGACTCCGAATAATTCATCGAGATTTGAAAGCAAGTAATATTCTTTTGGATGAAGATATGAATCCAAAAATTTCAGATTTTGGACTCGCTAGAATATTTGGAGGAGGCCAAAGTGAGGCGAACACTACTAGAGTAGTTGGCACATATGGCTATATGTCCCCGGAGTATGCAATGGAAGGTCTATTCTCAGTTAAATCAGATGTCTATAGTTTTGGTGTATTATTACTTGAGATTGTAAGCGGTCGCAAAAACACTAGCTTTCGTCATTCTGATGACTCAAGTCTCATAGGATACGCTTGGCATCTTTGGAATGATCATAGAGCAATGGAGCTTGTTGATCCTTCGATTTGCGATTCGAGTCAGAAGAACAAGGTTTTGAGATGCATAAACATAGGGATGCTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACAATGTCTTCTGTGGTGTTGATGCTAGAAAGTGAAGCAGCCAATCTTCCTTTGCCAAGACAGCCTTTGCTTACTTCCATGAGAAGACGATCAGAAGACAGAGATTTTTACATGGAAGGTCTTGATGTTTCCTTGAATGAACTTACAGTTACAATGGTGGTAGGAAGATAG 2613 0.4191 MPVFRTPTRDMGLTPRTILFRLLFPFFFILCVLTLLSHAASSITRGKLIRDGPDGDTLLSDELNFELGFFSFDNNSSLRYVGIWYYRIPRAEYIWVANRDEPIKGRVGVITIESDGNLVIFDGDKNRVWSSNVPDSKNNTEAVLRDDGNLVLSTTDDENEIWKSFDHPTDTFLPGMTIPVDPSKGEIRSFVSWKSRTDPARGNFSMGIDPRASTQIVIWEGEKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNTDENGERHLAYTPLNITDKVRFQIGWDGFERQFKWNEGEKQWVRTQEEPYNKCEIYNKCGSFAECSLVSPMKCFCIRGFEPKEVDEWNRENWSGGCKRMTPLKAERKKNSNNASSVAATEVDVEEDGFLQLQCRKLPDFAILVGSQDKKDCESYCLQDTNCTAYTSVNGIGCLIWHGELHDIKHFVGGGGNTLYIRLAHSDLGDGKKKIKIVIIFAIVLGSICVGISLWLVWRFKRRKVSAVSCCKTSDIPVFDTTRSKSRQVSAELSGSAELSLEGHELSGPELPLFNFDCIAIATDNFSEENKLGQGGFGPVYKGKLRGGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEFMPNKSLDHFLFDPIKQQQLNWTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGGQSEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNDHRAMELVDPSICDSSQKNKVLRCINIGMLCVQDSAAHRPTMSSVVLMLESEAANLPLPRQPLLTSMRRRSEDRDFYMEGLDVSLNELTVTMVVGR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral238g00002 870 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 814 - -
Pral238g00002 870 PIRSF SRK 14 870 IPR024171 GO:0004674
Pral238g00002 870 SMART serkin_6 553 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00002 870 SMART ntp_6 376 450 IPR003609 -
Pral238g00002 870 Pfam Protein tyrosine and serine/threonine kinase 556 821 IPR001245 GO:0004672|GO:0006468
Pral238g00002 870 SUPERFAMILY Protein kinase-like (PK-like) 538 846 IPR011009 -
Pral238g00002 870 CDD B_lectin 54 168 IPR001480 -
Pral238g00002 870 CDD PAN_AP_plant 375 451 - -
Pral238g00002 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 519 628 - -
Pral238g00002 870 ProSiteProfiles Bulb-type lectin domain profile. 40 165 IPR001480 -
Pral238g00002 870 ProSiteProfiles PAN/Apple domain profile. 376 451 IPR003609 -
Pral238g00002 870 SMART blect_4 49 168 IPR001480 -
Pral238g00002 870 CDD STKc_IRAK 559 824 - -
Pral238g00002 870 Gene3D - 36 165 IPR036426 -
Pral238g00002 870 Pfam PAN-like domain 377 435 IPR003609 -
Pral238g00002 870 Gene3D Phosphorylase Kinase; domain 1 529 628 - -
Pral238g00002 870 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 199 IPR036426 -
Pral238g00002 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 165 - -
Pral238g00002 870 ProSiteProfiles Protein kinase domain profile. 553 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00002 870 Pfam S-locus glycoprotein domain 226 335 IPR000858 GO:0048544
Pral238g00002 870 Pfam D-mannose binding lectin 93 194 IPR001480 -
Pral238g00002 870 Gene3D Transferase(Phosphotransferase) domain 1 629 831 - -
Pral238g00002 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Pral238g00002 870 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 629 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral238g00002 Pral-Chr238 29838 33592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral238g00002 527 836 Receptor kinase-like Gene Family AT4G23230 61.736 5.94e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral238g00002 PK_Tyr_Ser-Thr 9.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral238g00002 - - pcin:129285104 1472.22