Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral238g00001 ATGATGTTGATCGCCAAATTACAACATAGAAACCTTGTTAGGCTTTTAGGATGTTCCATTCAAGGGGAAGAGAAGTTGTTGGTATATGAATTTATGCCAAACAAAAGCTTGGATCACTTTTTATTTGATCCTATCAAACAGCAACAACTAAACTGGACTAAGCGCTTTGAAATCATCGAAGGGATTGCAAGAGGGTTGCTTTATTTGCATCGGGATTCAAGACTCCGAATAATTCATCGAGATTTGAAAGCAAGTAATATTCTTTTGGATGAAGATATGAATCCAAAAATTTCAGATTTTGGACTCGCTAGAATATTTGGAGGAGGCCAAAGTGAGGCGAACACTACTAGAGTAGTTGGCACATATGGCTATATGTCCCCGGAGTATGCAATGGAAGGTCTATTCTCAGTTAAATCAGATGTCTATAGTTTTGGTGTATTATTACTTGAGATTGTAAGCGGTCGCAAAAACACTAGCTTTCGTCATTCTGATGACTCAAGTCTCATAGGATACGCTTGGCATCTTTGGAATGATCATAGAGCAATGGAGCTTGTTGATCCTTCGATTTGCGATTCGAGTCAGAAGAACAAGGTTTTGAGATGCATAAACATAGGGATGCTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACAATGTCTTCTGTGGTGTTGATGCTAGAAAGTGAAGCAGCCAATCTTCCTTTGCCAAGACAGCCTTTGCTTACTTCCATGAGAAGACGATCAGAAGACAGAGATTTTTACATGGAAGGTCTTGATGTTTCCTTGAATGAACTTACAGTTACAATGGTGGTAGGAAGATAG 822 0.3954 MMLIAKLQHRNLVRLLGCSIQGEEKLLVYEFMPNKSLDHFLFDPIKQQQLNWTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGGQSEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNDHRAMELVDPSICDSSQKNKVLRCINIGMLCVQDSAAHRPTMSSVVLMLESEAANLPLPRQPLLTSMRRRSEDRDFYMEGLDVSLNELTVTMVVGR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral238g00001 273 Gene3D Transferase(Phosphotransferase) domain 1 32 234 - -
Pral238g00001 273 PIRSF ILK 1 238 - -
Pral238g00001 273 SUPERFAMILY Protein kinase-like (PK-like) 3 249 IPR011009 -
Pral238g00001 273 Pfam Protein tyrosine and serine/threonine kinase 3 224 IPR001245 GO:0004672|GO:0006468
Pral238g00001 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Pral238g00001 273 SMART serkin_6 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00001 273 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 269 - -
Pral238g00001 273 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 234 - -
Pral238g00001 273 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral238g00001 273 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral238g00001 Pral-Chr238 29838 42321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral238g00001 1 239 Receptor kinase-like Gene Family AT4G23230 64.583 1.47e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral238g00001 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral238g00001 - - pcin:129285104 487.263