Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2386g00002 ATGAATCTCTCCTATCTTAATCGCTTCCCCGAGCGTCTTGTTGCTCCTCTCTACTCTACAACTCCCATCAGAAGCCACCGGACGGATGATATTGCTATTGAAGGTCGTAACCTGAATTTCTCGTTCCCCACAAGGCAGGTGAAAGCTGTACCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGTCTCTTAAATCCTACTGCAGGAACAGTGTGCGTGAAAGGCCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCAACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCAATGATGAAGTGAAATCAAGGGTATCAAGAGCGTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGCGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACGTTCTTAGATGAAAATGACCAGGTTGGTGTTATCAAAGCAGTTAGGAATTCTCTGGATACTTCTGCAGGGGTTACAGCATTGTGGGTCACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTCTACATGGAGGATGGGAAAGTTGTGATGCATGGAGATGCTGAAAGAATTAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 789 0.4474 MNLSYLNRFPERLVAPLYSTTPIRSHRTDDIAIEGRNLNFSFPTRQVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTAGTVCVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTNDEVKSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEDGKVVMHGDAERIKSFIEARQSDYIKQINS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2386g00002 262 SMART AAA_5 62 225 IPR003593 GO:0016887
Pral2386g00002 262 Pfam ABC transporter 53 185 IPR003439 GO:0005524
Pral2386g00002 262 Gene3D - 28 261 IPR027417 -
Pral2386g00002 262 CDD ABC_cobalt_CbiO_domain1 34 235 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pral2386g00002 262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 258 IPR003439 GO:0005524
Pral2386g00002 262 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 33 247 - -
Pral2386g00002 262 FunFam ABC transporter I family member 10 29 259 - -
Pral2386g00002 262 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524|GO:0016887
Pral2386g00002 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2386g00002 Pral-Chr2386 18507 21207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2386g00002 20 240 Calmodulin-binding Proteins AT2G36910 30.544 2.42e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2386g00002 - - pcin:129309668 483.026