Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2386g00001 ATGTGTGAGAGTAGCAAGAAAGGGAAACGGAAATCGGAGGATGAAACAGAAAATGTGGAGAGTGAAGGAGAAAGAGAGGTGGCCTTAGCCTGGGGAGCGAAGCCAGAAGTTGATCATAAAGAGCAATTAGCGTCATCGCGGTTCCCAGCTGATTTTAAAATGTCTACTTCGTGTGGCAAGAAGAAGAATATTGATAATAGTCAAAGTCTTGTGTTACCTAGTACTTTGACCGTAATGTTCATCACTAGCTCCAGTAATTCTGCCTCAACCTCTTATCATCATCCAATTTCTCAGTTTAATTCTCAAAGTTCTTCAACTTTGAATGGTGAAGCAAGCGAATGGAAGGGAAAGAAGAAGGAGGATATTGGAAGTATTGTGTTGCCTGAAACCTCTATTTTCTACGGTCTCAGAACTGTTTCCACCATAATATTTAGCAGCTCCGAATCTGACACCAACGCTCCTAATTCTGCAATCTCTTATGATGATCAAGCTAATAATGCTAACAGTTCTGCATCTTTCAATGCTCAAACAATTGAAGTAAAAGAGTACACTGCCAGTAACCCATCCAAGTGGAAGAGAGGAAAAATTTTAGGGCAAGGAGCATTTGGGCGTGTTTATAAAGGATTTAACAGTGAAACGGGGCAAATATGTGCAATTAAAGAAGTCTTTTATGCTGATGATGATGACAGATCAGAAAAATGCCTTCAACAACTTTGTCAGGAGAAAAATATTCTCTCTCAGCTTTCACATTCCAACATCGTGAAATATTATGGAAGACTTGCCTACTTGCATAGCAGAAACATAGTACACAGGGATATTAAAGGAGCTAATATACTGGTTAATCCTTATGGTGAAATTAAACTGGCCGACTTTGGAATGGCAAGATATGTAAATTCTTCTTCTAAGATGTATTCTTTCAAGGGAACTCTATATTGGATGGCTCCAGAGATGGTGGACAACAAAAATGGATATACTATTGCTGTGGATATATGGAGTTTAGGATGTACAGTTCTAGAAATGGCAACACAAAAACCTCCATGGAGTCAATATAAAAGGGAAGTTGCAATAGCAAAAATTGGGAATAGCAGAGACTTACCAACTATTCCAAATCATCTTTCAGATAACGCAAAGTCTTTTATAAGATTTTGCTTACAAAGAGATCCAGATGCTCGACCACCCGCACATCAATTACTTGATCATCCTTTTATTAGAGAATATTAA 1221 0.3825 MCESSKKGKRKSEDETENVESEGEREVALAWGAKPEVDHKEQLASSRFPADFKMSTSCGKKKNIDNSQSLVLPSTLTVMFITSSSNSASTSYHHPISQFNSQSSSTLNGEASEWKGKKKEDIGSIVLPETSIFYGLRTVSTIIFSSSESDTNAPNSAISYDDQANNANSSASFNAQTIEVKEYTASNPSKWKRGKILGQGAFGRVYKGFNSETGQICAIKEVFYADDDDRSEKCLQQLCQEKNILSQLSHSNIVKYYGRLAYLHSRNIVHRDIKGANILVNPYGEIKLADFGMARYVNSSSKMYSFKGTLYWMAPEMVDNKNGYTIAVDIWSLGCTVLEMATQKPPWSQYKREVAIAKIGNSRDLPTIPNHLSDNAKSFIRFCLQRDPDARPPAHQLLDHPFIREY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2386g00001 406 Gene3D Transferase(Phosphotransferase) domain 1 174 259 - -
Pral2386g00001 406 SUPERFAMILY Protein kinase-like (PK-like) 178 405 IPR011009 -
Pral2386g00001 406 SMART serkin_6 191 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2386g00001 406 ProSiteProfiles Protein kinase domain profile. 191 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2386g00001 406 MobiDBLite consensus disorder prediction 1 26 - -
Pral2386g00001 406 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 258 - -
Pral2386g00001 406 Pfam Protein kinase domain 260 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2386g00001 406 Pfam Protein kinase domain 192 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2386g00001 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pral2386g00001 406 Gene3D Transferase(Phosphotransferase) domain 1 260 406 - -
Pral2386g00001 406 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2386g00001 Pral-Chr2386 7255 16564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2386g00001 182 404 MAP Kinase Kinase Kinase AT1G53570 56.180 2.44e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral2386g00001 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2386g00001 K04421 - vvi:100243772 317.005