Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2384g00001 ATGCATTTCCTCAAATTAAAACCCACTCTTCCATATTCTCTGAGCAATTTGTCCAGATCCTTTCTCTCTCTGTTCTCTACTATTGTTTCTCCCTATACTCAAGCCTCACCCGAACACATTCCCATCATTGATTACCTAAACAGCAACTTCAAATTCTCCGAAGTTCAGTCCATCTATATCTCAAAGCAACTGACTAAGACTAGGTGCCCTCGCAATCCCTCGTCCGTGCTTAATTATTTTAAACAGATTGGATTTTCTGAGTCCCAGATTCAATCTTTGATTAGTCGTCGACCCCAGTTACTGTTCTCACGAATTGGTAAAACCTTGAAGCCGAAAATTGACTTTCTTCAGCTTCAAGGGTTTGAGGGATCTGAGCTGGGTGAGCTTCTTTCCAAGAATTCACTTCTTTTGACTTATGGTTTGAATGAGAAATTGGTTCCCCTTCTGGAGACTCTTAGGAAAATTGCCTACAATAAGGAAGATTTTTTTAGAGTTCTTTGCAGGTCTGGGTCCTGGAAAATGGCAAATCACCAAAGAATTTTGAACAATGCTGCTTTCTTGGAGAGTTGTGGGATCGTTGGATCTCATCTTTCAATGTTACTGTCACGGCAACCTTTTCTTTTTTCTGCACCGGAGTCCCTGGTTCGAAACTATGTTTCACGGGCTGTAAACATGGGTTTCTCCATAAACTCAGGAATGTTGGTACATGGGCTTCGGACAATTAGTGGTATGAACATTGTTAAGTTCGACAGAAAGTTGGAAATGATTCAGAATTGTGGGTTTTCTAAAGATGAGACCATGCAAATGTTTACAAGAACTCCAGCATTGCTTGACAGATCTGAGAAGAGGCTGAAGTTTAAAATTGAAGTGTTCTTGAATAAAATTATGCTGCCTAAGTCAGTACTGATTAATAACCCTGTGATTTTGATGTTAAGCTTGGAGAAAAGGGTGATCCCTCGATGGAGGGTACAGCAACTGCTGATCTCAAAAAATTTACTTGAGAAGAATCCAAGTTTTTTTGCGGTGCTAAAATTGCGGGAGGAGAAATTCTTGGAGAAGTATATTTCCAAGTTTAGCGATAATGAAGAGGCTTTACTGGAGGCTTACAAGAGCCACCATCTGGAAGATGCTTCTACATGA 1140 0.4026 MHFLKLKPTLPYSLSNLSRSFLSLFSTIVSPYTQASPEHIPIIDYLNSNFKFSEVQSIYISKQLTKTRCPRNPSSVLNYFKQIGFSESQIQSLISRRPQLLFSRIGKTLKPKIDFLQLQGFEGSELGELLSKNSLLLTYGLNEKLVPLLETLRKIAYNKEDFFRVLCRSGSWKMANHQRILNNAAFLESCGIVGSHLSMLLSRQPFLFSAPESLVRNYVSRAVNMGFSINSGMLVHGLRTISGMNIVKFDRKLEMIQNCGFSKDETMQMFTRTPALLDRSEKRLKFKIEVFLNKIMLPKSVLINNPVILMLSLEKRVIPRWRVQQLLISKNLLEKNPSFFAVLKLREEKFLEKYISKFSDNEEALLEAYKSHHLEDAST 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2384g00001 379 Gene3D Transcription termination factor 3, mitochondrial 132 361 IPR038538 -
Pral2384g00001 379 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 198 228 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 163 193 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 FunFam Mitochondrial transcription termination factor-like 141 361 - -
Pral2384g00001 379 Pfam mTERF 141 351 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 Pfam mTERF 77 206 IPR003690 GO:0003690|GO:0006355
Pral2384g00001 379 PANTHER CGI-12 PROTEIN-RELATED 42 357 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2384g00001 Pral-Chr2384 7629 16693 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral2384g00001 mTERF 5.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2384g00001 K15031 - cave:132191063 299.671