Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2381g00003 ATGGCCAACTCCAGGCGGCTTAGGGCATTCAAGCGATGGATGGCATCCCGGGGTTTCGAAATCAGCGATGGCCTGGAGTTCGTAGACGATCCCGGAAATGGAATTGCGGTGAGAGCTTTGTGCCAGTTGAAGGAAGGCGATGTTGTTGCCAGAATACCGAAGGATGCTTGCCTGACGATTAAGACTAGTGGGGCGAGTCAAATGATTGAAGACTATGGTTTGGCTGGTAATCTGGGACTAGCAGTGGCTCTAATGTATGAGAGAAGCTTGGGCGAGAAGTCACCCTGGGCTGGCTACCTTCAGGTTTTGCCTCACCAAGAGTGCCTGCCGTTAGTGTGGACTCTGAACGAAGTGAACGAGCTTTTGAGTGGAACTGAGCTACACAAGACGGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCCGTCTTGGATTTTTCACCTTCAAAGCTTAACCTAAAATATTTCGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTATTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCCTTGGCTGACCTATTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACTGCTGTATCATCAAACTATGATAATGATGATGATGGAAATGAGTGTGTCACTGATGAAGAAGAATTGGCTGAAAATTCTTCAATGGATGGGACTGAGTTGGATACTGCTCTTATTGGGAAATACAGTGATGGCAACTTGGAGTCATCCTCAGTTGTGGGAGATGATTCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCGTTGGAGCTGAGGTATTTAACACATACGGTTCAATGGGCAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAACTCCTATGATATTGTGAACATTGATTTGGAGCTGGTTCTTCAGTGGTGTTCTTCTTTGTTTTCATCTCGATACTCTCGAGCAAGAGTCTCTCTTTGGAGAAGGCTGGGCTATTCTGCATGTGTCAGCCAAAACTTGGAATATTTTGAGATATCATCTGATGGAGAACCACAGATTGAACTCCTGATTTTATTATACATTATGTTATTATCAGAAGATGCGTACCATAAGTTAGACTTATCGGTGTCGGTTGTGGGGAATGTTCATGAATCAAGTGAAACTTATCTTTCAGGAGATTGCAATATCTTGACAAAGAAAGCATCTGATATGAGTAAGGAATCCTTGCTGACTAGAAAAGTTTGTGATGCTTTGTTCTCTGTTGCTGATATGCGTGAAAGTCTTTATGGTAACTCAATAGAAGATGATATTGAGACATTAGGGAGGTGTAACTGTGTTAGGGAAAGAAAGCTGTTTCATTCTTTGGTGCTGCGCATCAGTGAAAGGAAGATCCTTGAAAAGCTCAGAAATTACGCTGCGCAGCCAATTAGAATTGGTAAGCGAAATTCTGCAAGGAAGAAAATGAAAAGCAGAAAAAAGTAA 1509 0.4221 MANSRRLRAFKRWMASRGFEISDGLEFVDDPGNGIAVRALCQLKEGDVVARIPKDACLTIKTSGASQMIEDYGLAGNLGLAVALMYERSLGEKSPWAGYLQVLPHQECLPLVWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPVLDFSPSKLNLKYFGVEEYFAARSLIASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTAVSSNYDNDDDGNECVTDEEELAENSSMDGTELDTALIGKYSDGNLESSSVVGDDSSMLEMIMIKDVSVGAEVFNTYGSMGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSSRYSRARVSLWRRLGYSACVSQNLEYFEISSDGEPQIELLILLYIMLLSEDAYHKLDLSVSVVGNVHESSETYLSGDCNILTKKASDMSKESLLTRKVCDALFSVADMRESLYGNSIEDDIETLGRCNCVRERKLFHSLVLRISERKILEKLRNYAAQPIRIGKRNSARKKMKSRKK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2381g00003 502 SUPERFAMILY SET domain 4 305 IPR046341 -
Pral2381g00003 502 PIRSF RMS1_SET 1 484 IPR011383 GO:0016279|GO:0018026
Pral2381g00003 502 Pfam SET domain 34 286 IPR001214 GO:0005515
Pral2381g00003 502 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 447 - -
Pral2381g00003 502 ProSiteProfiles SET domain profile. 23 286 IPR001214 GO:0005515
Pral2381g00003 502 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 296 486 IPR036464 -
Pral2381g00003 502 CDD SET_LSMT 24 300 - -
Pral2381g00003 502 Gene3D set domain protein methyltransferase, domain 1 3 299 - -
Pral2381g00003 502 Gene3D - 302 491 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2381g00003 Pral-Chr2381 34086 39591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2381g00003 1 497 NAC Transcription Factor Family AT3G56570 57.358 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral2381g00003 SET 5.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2381g00003 - K05302 vra:106769924 706.827