LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2374g00006	ATGAACAAGCAGTATTGCAAAGCTTTCATTTCTCTGTTCTTCATTCTTCTTTCATTCCTCACACTTATTTCCTCAGTAACATGTGATGATACGAAGACTTACATCGTCTACTTGGGATCACTTCCTAAGCAATCATCTTCTTATTCTCCAACCTCACACCACCTCACAATTCTTCAACAAGTTATTGATGGAGCTGTCGTCAATGCAAGTTCTTGCTTGGTTCGAAGTTACAGTAAGAGCTTCAATGGCTTTGCTGCAAAACTCACCAGTGATCAAAGAGACAAGATAGCTGACATGGACGAGGTGGTCTCTGTGTTTGAAAGCAAAACTCTCAGAATTCAGACGACAAGATCATGGGACTTCATGGGATTCGTCGAGAAGGCTATAAAGCGAAACTCTTCAGCTGAGAGTGATGTTGTGGTCGGACTCATAGACACCGGAATATGGCCGGAGTCGGAGAGTTTCAGCGACGAAGGTCTCGGCGGTGTTCCTGAGAAATGGAGAGGGACTTGTGCTGGCGGCAAGAACTTCACCTGCAACAAGAAGATCGTTGGAGCTCGGTACTATCCTGTAACTAGTGATTCTGCCAGAGATGAAGAAGGCCATGGAACCCACACTGCCGCTATAGCAGCTGGGAACATAGTTCATGGAGTCAGCTTTTATGGGATAGCAAATGGTACAGCAAGAGGAGGAGTTCCTTCTGCGAGGATAGCTACCTATGCAGCTTGTGATAAACTAGGAAATTGTCCAGACGAAGATATCTTGTCTTCTTTTGATGACGCCATTTCAGATGGCGTTCACATCATTTCAGTGTCACTATCAAGCGCAGGTCCTAGGGATTTAACCGATGATCCAATAGCCATAGGATCTTTCCACGCTATGGAGAAAGGGATCCTCACCGTCCAAGCTGCCGGCAACTATGGTCCTTCATTTGGCTCAGTTTCAAGTGTGGCACCATGGATCCTAGCTGTAGCAGCAAGCACTACAGATCGTAAAATCATCGACAAACTTGTTCTTGGGAATGGACACACACTGATTGGGAATTCCATAAATGCTTTTGGTTCAAATGGTACGATGTTTCCTATAGCTAAGGTAAATGGTGATTCAAAAGTTGTGCAAAAGATTTTCAAAGATTGTTCTTGTTTTGACACAAACCTGGTAAAAGGGAAGATTGTGCTGTGTCGTGATCGTCCTCTGTTTACGTTTAACTCTAATGCTAAGTCTCAAGGTATAGTTGGCGTCATCACAGCTTCACTTTTCCGAATTGAAGATGTCTCAGAAGTTGTGTCACTACCTTCATTAGACATTTCCAAAGACTCTTTCGACATTGTCGTGTCCTACATAAATTCAACCCACGATCCAAAAGCTGAGATAAAGAGGAGTGAGATTTGTGTAGATAAAATGGCTCCAAGAACAATTGATTTCTCTGCACGTGGGCCAAATTTCTATGTAGCAGAGATCTTAAAGCCGGATATAAGTGCTCCTGGAGTTGATATTTTGGCTGCATATTCACCTGTTGCACCTGTTTCAGAATTTGCAGATGAAAACAGATCTGTCAAATACAATTTTTTGTCAGGGACTTCCATGGCTTGCCCGCATGTTTCTGGAATAGCTGCATATTTGAAGACCCTTCATCCAGATTGGTCACCAGCGGCTATCAAATCAGCCATTTTAACAACAGCAAGACCTATGAAGAAAGCTTATTCTGATGATGCAATTGGTGAGTTTGAATATGGATCGGGGCACGTGGATCCAATACAAGCCAGTGATCCTGGGTTGGTTTATGACATATCTCAGAAAGATTATGTAGAAATGTTGTGCAATTTTGGCTATGACAGCTCTATGGTTAAGCAGATGTCTGGAGACAATAGCAGTTGTCCCAGATCTTCTCATAGAGACTTGGTCAAAAATCTGAATTATCCGCTAATGGGAGTTAATGTTAAGCCTTTTACGCCATTCAAGGTTCAGTTCAAGAGGACAGTGACAAATGTTGGATTTGCCAATTCAACCTACAAAGCAAGCATTATACCAGCATATTTGAGGTTGAATATTACAGTAAACCCTAAGGTTCTTTCCTTCAAATCGTTGAACGAGAAGAGGTCTTTCGTTGTTAGTATTACTAGCAAAAGGGGCTTCAAAAATCAAACGGCATGCACCTCATCATTGACATGGTCAGATGGGACCCACAAGGTGAGAAGTCCAATTGTTCTGATGTCGTTTAAGGAGCTCTTTTCTAGTTGA	2241	0.4257	MNKQYCKAFISLFFILLSFLTLISSVTCDDTKTYIVYLGSLPKQSSSYSPTSHHLTILQQVIDGAVVNASSCLVRSYSKSFNGFAAKLTSDQRDKIADMDEVVSVFESKTLRIQTTRSWDFMGFVEKAIKRNSSAESDVVVGLIDTGIWPESESFSDEGLGGVPEKWRGTCAGGKNFTCNKKIVGARYYPVTSDSARDEEGHGTHTAAIAAGNIVHGVSFYGIANGTARGGVPSARIATYAACDKLGNCPDEDILSSFDDAISDGVHIISVSLSSAGPRDLTDDPIAIGSFHAMEKGILTVQAAGNYGPSFGSVSSVAPWILAVAASTTDRKIIDKLVLGNGHTLIGNSINAFGSNGTMFPIAKVNGDSKVVQKIFKDCSCFDTNLVKGKIVLCRDRPLFTFNSNAKSQGIVGVITASLFRIEDVSEVVSLPSLDISKDSFDIVVSYINSTHDPKAEIKRSEICVDKMAPRTIDFSARGPNFYVAEILKPDISAPGVDILAAYSPVAPVSEFADENRSVKYNFLSGTSMACPHVSGIAAYLKTLHPDWSPAAIKSAILTTARPMKKAYSDDAIGEFEYGSGHVDPIQASDPGLVYDISQKDYVEMLCNFGYDSSMVKQMSGDNSSCPRSSHRDLVKNLNYPLMGVNVKPFTPFKVQFKRTVTNVGFANSTYKASIIPAYLRLNITVNPKVLSFKSLNEKRSFVVSITSKRGFKNQTACTSSLTWSDGTHKVRSPIVLMSFKELFSS	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2374g00006	746	ProSitePatterns	Serine proteases, subtilase family, serine active site.	526	536	IPR023828	-
	Pral2374g00006	746	Pfam	Peptidase inhibitor I9	33	113	IPR010259	-
	Pral2374g00006	746	PRINTS	Subtilisin serine protease family (S8) signature	198	211	IPR015500	-
	Pral2374g00006	746	PRINTS	Subtilisin serine protease family (S8) signature	525	541	IPR015500	-
	Pral2374g00006	746	PRINTS	Subtilisin serine protease family (S8) signature	136	155	IPR015500	-
	Pral2374g00006	746	Pfam	Subtilase family	137	577	IPR000209	GO:0006508\|GO:0008236
	Pral2374g00006	746	Pfam	Fibronectin type-III domain	637	736	IPR041469	-
	Pral2374g00006	746	CDD	PA_subtilisin_like	337	458	-	-
	Pral2374g00006	746	SUPERFAMILY	Subtilisin-like	133	589	IPR036852	GO:0004252\|GO:0006508
	Pral2374g00006	746	Gene3D	-	606	740	-	-
	Pral2374g00006	746	Gene3D	-	330	465	-	-
	Pral2374g00006	746	Gene3D	Peptidase S8/S53 domain	138	602	IPR036852	GO:0004252\|GO:0006508
	Pral2374g00006	746	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	589	-	-
	Pral2374g00006	746	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	736	IPR045051	-
	Pral2374g00006	746	CDD	Peptidases_S8_3	111	561	IPR034197	-
	Pral2374g00006	746	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	113	IPR037045	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2374g00006	Pral-Chr2374	36348	39038	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2374g00006	38	741	Subtilisin-like Serine Gene Family	AT5G59190	53.173	0.0	719

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2374g00006	-		-	pcin:129302788	894.034