Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2373g00001 ATGGCTAACTGCTCAATCACAGTACAGTGCTTCGTCTTGGTGACGCTACTTCTGCAACTCCTCTCATCATCATCCTTGGCTTCTTCTACAGTTACAGTCTCCATTGATGGCCACGGAGATTACACCACAATCGCCCAAGCCATATCAGAAGCTCCCTCCCACAGCGGCACAAAACACACCATTCTCGTCCGACCCGGAATCTACAAGGAACTTCTCCACATCCCACGAGACAAAACCAACATTCTTCTCATCGGCGACGGTCGTCATAATACTGTCATCTCGGACACCAAAATGGCGGCACCTTCAATTCACGGAGCGGGCTTCGTGGGCCAGAGTATAGCCTTTGTGAATTCAGCTGGGCCGAAGGCGGGCCCAGGGATTGCTCTGTTGAACGCGGCGGACAGGTCGGTGCTGTACAACTGCTCCATCGAGGGCTTTCAGGACACCTTATGGGCTTCATTGGGCCGTCAATTTTACCGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGAAACGCCGCCGCCGTTTTCCAGAACTGCATGCTCTACGCACGCCTCGCCAGCTTCTCCGTTTTCACCGCCCAGTCTCGCGACGACCCTCTGCAACGCACCGGTTTTGTTTTCCATTACTGTCGTTTTACGGTGTCTCCTGGTGATGACGCCGGGAAGCAGTTATCCGGTGCGGGCAACGCTATTTTAGGACGGCCATGGAGGGCGTATTCGAGGGTGGTGATCATGCGGTCGTATATTGATGATATAGTGAGTCCAATGGGGTGGGGAGAGATGAAGGGGACGCCAACAGATAAGGTGACTTACGTGGAGTTTGAGAACGAAGGGCCTCGATCGAACACACGTGGGAGAGTGAGGTGGATTGGTGTTGTGGAGGTGCATGATAAGGATCAGGTGAAGGACTTCACTGTGTCGAGGTTCATAAAAGGAGATGACTGGATCCCTCCAACTGGGGTTCCATACATGGGAGGATTATAA 993 0.5327 MANCSITVQCFVLVTLLLQLLSSSSLASSTVTVSIDGHGDYTTIAQAISEAPSHSGTKHTILVRPGIYKELLHIPRDKTNILLIGDGRHNTVISDTKMAAPSIHGAGFVGQSIAFVNSAGPKAGPGIALLNAADRSVLYNCSIEGFQDTLWASLGRQFYRECHIYGSVDFVMGNAAAVFQNCMLYARLASFSVFTAQSRDDPLQRTGFVFHYCRFTVSPGDDAGKQLSGAGNAILGRPWRAYSRVVIMRSYIDDIVSPMGWGEMKGTPTDKVTYVEFENEGPRSNTRGRVRWIGVVEVHDKDQVKDFTVSRFIKGDDWIPPTGVPYMGGL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2373g00001 330 FunFam Pectinesterase 4 27 330 - -
Pral2373g00001 330 Pfam Pectinesterase 31 316 IPR000070 GO:0030599|GO:0042545
Pral2373g00001 330 SUPERFAMILY Pectin lyase-like 25 329 IPR011050 -
Pral2373g00001 330 Gene3D - 24 330 IPR012334 -
Pral2373g00001 330 PANTHER PECTINESTERASE 28 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2373g00001 Pral-Chr2373 4853 5974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2373g00001 18 330 Carbohydrate Esterase AT3G05620 40.061 8.70e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2373g00001 K01051 - gmx:102665195 296.204