Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2372g00001 ATGGAGAATGAAAATGATGTGAATCATGGAGATGATGTGAATGACATAGAAAACGAAGGTCCAGTGGATAGGAAGGACAATGGGAGGTACTGGTCAGAGTTTTCTGAAAGAAACATGACATATACAGAGCCACTTCTGGTGAAGAGGATCAACACCACCTCGCAGATCGCCATAGTTGGTGCCAACCTTAGCCCCATTGAAAGCCTTGATTATGAGATATTTGAGAATGAAATATTTAAACAGGACTGGAGATCAAGGAGCAAGATTCAGATATTCCAGTATGTGATACTTAAGTGGGCATTTGCTGCTCTTATTGGATTAGGCACTGGTCTACTTGGCTTCCTCAATAATATTGCCGTTGAGAATATTGCTGGTTTCAAGCTGCTTCTGGCGTCCAACCTCATGTCCCAGCACAGATACATTCTAGCATTTGTGGCATTAGCTGGTTGCAATATAGGTTTAGCAGCGGCGGCTGGATCTCTTTGTGCTTTCATTGCTCCAGCTGCAGCAGGCTCTGGTATTCCTGAGGTGAAAGCCTATCTCAATGGTATTGATGCTCATAATATACTGGCTCCAACCACTCTTTTTGTGAAGGTTTTTGGTGCCATCCTTGGAGTTTCTGCTGGATTTGCGGTGGGCAAAGAGGGGCCTATGGTACACACAGGTGCATGCATTGCTTCCTTGTTAGGGCAGGGTGGATCGCGCAAGTATCGCTTGACTTGGATGGGGCTAAGATATTTCAAAAATGATCGAGACCGGCGAGACATGATTACTTGTGGCGCTGCAGCTGGTGTTGCTGCTGCATTTCGTGCTCCAGTAGGTGGTGTTCTCTTTGCCCTTGAAGAGGCCGCTTCCTGGTATCTATTTCTACTGCAATTGTGCTATTATGCTTCCTTTTCTGACTTTAATTTTTTTGCGAATTTATATTTGATTACTGTTTGA 942 0.4448 MENENDVNHGDDVNDIENEGPVDRKDNGRYWSEFSERNMTYTEPLLVKRINTTSQIAIVGANLSPIESLDYEIFENEIFKQDWRSRSKIQIFQYVILKWAFAALIGLGTGLLGFLNNIAVENIAGFKLLLASNLMSQHRYILAFVALAGCNIGLAAAAGSLCAFIAPAAAGSGIPEVKAYLNGIDAHNILAPTTLFVKVFGAILGVSAGFAVGKEGPMVHTGACIASLLGQGGSRKYRLTWMGLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWYLFLLQLCYYASFSDFNFFANLYLITV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2372g00001 313 Gene3D Clc chloride channel 90 307 - -
Pral2372g00001 313 SUPERFAMILY Clc chloride channel 76 298 IPR014743 -
Pral2372g00001 313 Pfam Voltage gated chloride channel 155 287 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral2372g00001 313 MobiDBLite consensus disorder prediction 1 28 - -
Pral2372g00001 313 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 26 287 - -
Pral2372g00001 313 PRINTS Chloride channel signature 262 281 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral2372g00001 313 PRINTS Chloride channel signature 167 184 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral2372g00001 313 PRINTS Chloride channel signature 198 217 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2372g00001 Pral-Chr2372 15770 19294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2372g00001 6 287 Ion Channels AT5G49890 72.438 2.47e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2372g00001 K05016 - jre:108982434 451.825