Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2367g00006 ATGAACTGTATTCGGCATCTTCCCTTATCCTCGGGTTTGCCTTTCCAGTGCTTTACAAGTCACCAAAGGAAGCCTCTTTGCTCTGTCAATTCACTGGGAATGTCCAATACTCGTGATCCAAATCGAAGCATGGCAGTGAAGTCTGCTTCTGGTTCCACGTCCAGTGCAGGGACAAATAGTGCCAGTGTGAAGGAAGAGGAAAAATCTGAGACATATAGTCATAATATGACTGAAGCGATGGGTGCTGTTTTGACTTATAGACACGAACTGGGAATGAACTACAACTTCATTCGTCCAGACTTAATTGTAGGATCATGCCTGCAGACTCCTGAAGATGTTGACAAGCTTCGCGCAATAGGAGTGAAAACTATATGTTGCTTGCAACAGGACCCAGACCTAGAATACTTTGGAGTTGATATCAAGGCTATTCAAGAATATGCTGGGTCTTTCAGTGACATTCAACACGTACGGGCTGAGATAAGGGACTTTGATGCATTTGACTTAAGGATGAGGCTTCCAACTGTAGTTAGCAAATTGTACAAGGCCATAAATCGCAATGGGGGCGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCGGGTGCTGCGTTGGCTTATATGTTTTGGATTCAGGGTTATAGACTCGATGAGGCTTATAGACTGCTTCTGAGCAAAAGATCATGCTTCCCAAAGTTGGATGCAATAAAAAGTGCAACAGCTGATATTCTTACAGGCCTAAGAAAAAAGCTTGTCATGTTGACGTGGGAAGACAACAAGTGCTCTTCAGTTGAAGTTTCTGGACTTGATATTGGATGGGGCCAGAGAATGCCCCTGCATTATGATGACAAACAGGGTTTGTGGGTTCTCAAGAGGGAATTACCTGTAGGACACTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAATCAGTATGAGCTTATGACCTCTCCCAACAAAGATGGCCATGTCAATAATTTTCTGCAAGTCATTGATGATACCGACAGTGCTGATGCAGCCCTAAGGGAGAGGTTGATGGGTGATGATCCTGATCTCACAAAGGCCGAACGGCTGAGAATAAGACAGTTTCTTGAAGCTCTTCCTGATGAAGAACCATGA 1128 0.4415 MNCIRHLPLSSGLPFQCFTSHQRKPLCSVNSLGMSNTRDPNRSMAVKSASGSTSSAGTNSASVKEEEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRAIGVKTICCLQQDPDLEYFGVDIKAIQEYAGSFSDIQHVRAEIRDFDAFDLRMRLPTVVSKLYKAINRNGGVTYIHCTAGLGRAPGAALAYMFWIQGYRLDEAYRLLLSKRSCFPKLDAIKSATADILTGLRKKLVMLTWEDNKCSSVEVSGLDIGWGQRMPLHYDDKQGLWVLKRELPVGHYEYKYIVDGEWTCNQYELMTSPNKDGHVNNFLQVIDDTDSADAALRERLMGDDPDLTKAERLRIRQFLEALPDEEP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2367g00006 375 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 235 IPR029021 -
Pral2367g00006 375 MobiDBLite consensus disorder prediction 38 62 - -
Pral2367g00006 375 Pfam Glycogen recognition site of AMP-activated protein kinase 253 335 IPR032640 -
Pral2367g00006 375 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 21 373 - -
Pral2367g00006 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 86 268 - -
Pral2367g00006 375 Gene3D Immunoglobulins 248 338 IPR013783 -
Pral2367g00006 375 MobiDBLite consensus disorder prediction 38 74 - -
Pral2367g00006 375 CDD E_set_AMPKbeta_like_N 253 333 - -
Pral2367g00006 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 248 338 - -
Pral2367g00006 375 Pfam Dual specificity phosphatase, catalytic domain 149 231 IPR000340 GO:0008138|GO:0016311
Pral2367g00006 375 SUPERFAMILY E set domains 252 333 IPR014756 -
Pral2367g00006 375 CDD DSP_laforin-like 92 239 IPR045204 GO:0019203
Pral2367g00006 375 ProSiteProfiles Dual specificity protein phosphatase domain profile. 93 250 IPR020422 GO:0006470|GO:0008138
Pral2367g00006 375 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 170 228 IPR000387 GO:0016311|GO:0016791
Pral2367g00006 375 Gene3D Protein tyrosine phosphatase superfamily 86 366 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2367g00006 Pral-Chr2367 55547 64211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2367g00006 92 374 Protein tyrosine phosphatase (PTP) family AT3G52180 69.611 1.88e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2367g00006 - - zju:107413253 585.104