Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2365g00001 ATGGCAATTGCAGCTTCGACCTCATCCTCCATCATGAGGATCAGCCATAGCTACCACAACCTCGACGACGACGACGACGAGAGGAAGCAGCCGCCAGCAGAGGCAGCAGAGGACGACGACGGTCACGAGCAGGACGTGGTGATGCCTGGGTTTCGCTTCCACCCAACTGAAGAAGAACTGGTTGAGTTCTACCTTCGCCGTAAGGTTGAGGGCAAGCCTTTCAATGTTGAGCTCATTACTTTCCTCGATCTTTATCGGTATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATTGGGGAGAAGGAATGGTACTTCTATGTGCCGAGAGATAGGAAGTATCGGAACGGTGATCGGCCGAACCGGGTGACTACTTCTGGGTATTGGAAGGCTACCGGAGCTGATAGAATGATCAAAACAGATGGATTCAGATCCATTGGGCTCAAGAAAACCCTAGTCTTTTATTCCGGTAAAGCTCCTAAAGGGATCCGAACCAGTTGGATTATGAACGAGTATCGCTTGCCTCACCACGAAACCGAACGATATCAGAAGGCTGAGATATCTCTTTGTCGAGTGTACAAGAGACCAGGCGTGGACGACCATCCCTCTCTCCCTCGTTATCTCCCGACATCATCATCAAGAGCTTCACATCATAATTCACACAGCAGCAAGAACAAGCACAACGTCAACCAATTAATGGCTCATCAGAACATCAGATTCCTAGGACAACAAACGGACCAGGTTGTCGATAAAATGAATCAAACTCACCTGGAAAACAGTCCAAGTGATGCCGACAAGTACAACAACAACAACAATCTGCAGGATCATCAGGACGAAGCGTTAATCCTCATGCAGCAACCAAAGCCGCAGCAAGCACAAACTCAACCTACAGAACCTGGAGCCTCCTCCTCCTTCTTCCCCGAAGGCTCCACTACTTCTAATTCTTCCTCATTGCCATCAAACGAAAATCTCAATACTGCAATAATGGTGGATGACCATCATCTCAATCGGCTAGTGAGTTATAATCAGCAGTTACAGCACTACAATAACATTTATGCTTCTGCAGTTCCTCCTCCTGCTCCTTCTCAAAGTCATCAGCAATATCAGCCCTACATGCAGTTCTCTAATATTCTGATGCAGCCCCAGCAATCAACATCGATGGCTCTTAACAATTCGCTTCCAAGCTCTTTCTCTGATAGATTGTGGGAGTGGAATCCAATTCCTGAGGCAACAAACCGAGACTTCACCAGCATGTCCTTCAAGTAA 1263 0.4782 MAIAASTSSSIMRISHSYHNLDDDDDERKQPPAEAAEDDDGHEQDVVMPGFRFHPTEEELVEFYLRRKVEGKPFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETERYQKAEISLCRVYKRPGVDDHPSLPRYLPTSSSRASHHNSHSSKNKHNVNQLMAHQNIRFLGQQTDQVVDKMNQTHLENSPSDADKYNNNNNLQDHQDEALILMQQPKPQQAQTQPTEPGASSSFFPEGSTTSNSSSLPSNENLNTAIMVDDHHLNRLVSYNQQLQHYNNIYASAVPPPAPSQSHQQYQPYMQFSNILMQPQQSTSMALNNSLPSSFSDRLWEWNPIPEATNRDFTSMSFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2365g00001 420 FunFam NAC domain-containing protein 35 56 197 - -
Pral2365g00001 420 Pfam No apical meristem (NAM) protein 49 173 IPR003441 GO:0003677|GO:0006355
Pral2365g00001 420 ProSiteProfiles NAC domain profile. 47 194 IPR003441 GO:0003677|GO:0006355
Pral2365g00001 420 MobiDBLite consensus disorder prediction 19 45 - -
Pral2365g00001 420 SUPERFAMILY NAC domain 46 194 IPR036093 GO:0003677|GO:0006355
Pral2365g00001 420 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 45 294 - -
Pral2365g00001 420 MobiDBLite consensus disorder prediction 286 319 - -
Pral2365g00001 420 MobiDBLite consensus disorder prediction 199 225 - -
Pral2365g00001 420 Gene3D NAC domain 56 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2365g00001 Pral-Chr2365 302 2676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2365g00001 1 222 NAC Transcription Factor Family AT2G02450 73.009 3.14e-113 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2365g00001 NAM 3.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2365g00001 - - pcin:129309516 568.926