Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2362g00002 ATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTGTCTTCTCTCCAACAGATGAAGAGCTAATACTTCACTTTCTTTATCCCAAGGCTTTCCTTCTACCCTGCCATCCCAATATCATCCCTGACCTTGATCTCTCTCTCTTTCACCCTTTCCAACTCAGCGGAAAGGCGTTGTCTTGTGGAAACCAATTCTATTTTTTCTGCAAGTATAAGAAGAGAAGAGTGACAGAAAGTGGGTATTGGAAGGAAATAGGTGTGACTGAATCAGTAGTTTCAGCTGAAGGCAAGAAAGTTGGGATCAAGAAGTATTCAGTGTTCAAAAATGGAGAAGCTCCCCATGGTACTGAAACCAGTTGGGCCATGCAAGAGTATCATCTTTGCTCTTCTGGGTTTAACATTCAAGGAAGCCCAAAACCTGATCATAAAAGTAAATGGGTGCTGTGCCGAGTCTATGAAAAGACGATGGATTCTGAAGATGATGATGATGATGAAGATGGAAGTACAGAGCTTTCATGGATGGATGAAATGTATATGTCGACGTTGGATGAAGAAGAAGAAGAAGAAGAAATTAGCTTCCCTAACTAG 585 0.4188 MGSERVNLPPGFVFSPTDEELILHFLYPKAFLLPCHPNIIPDLDLSLFHPFQLSGKALSCGNQFYFFCKYKKRRVTESGYWKEIGVTESVVSAEGKKVGIKKYSVFKNGEAPHGTETSWAMQEYHLCSSGFNIQGSPKPDHKSKWVLCRVYEKTMDSEDDDDDEDGSTELSWMDEMYMSTLDEEEEEEEISFPN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2362g00002 194 PANTHER NAC TRANSCRIPTION FACTOR 56 8 164 - -
Pral2362g00002 194 ProSiteProfiles NAC domain profile. 8 153 IPR003441 GO:0003677|GO:0006355
Pral2362g00002 194 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Pral2362g00002 194 Gene3D NAC domain 17 157 IPR036093 GO:0003677|GO:0006355
Pral2362g00002 194 SUPERFAMILY NAC domain 4 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2362g00002 Pral-Chr2362 7239 8138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2362g00002 5 158 NAC Transcription Factor Family AT1G52890 43.210 1.56e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2362g00002 NAM 4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2362g00002 - - adu:107470472 231.491