Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2359g00004 ATGGAGAGTGAAACCACCAATGAAGCAAGAAGCATGTCGAAAGATGAAATAGAGAAGCTTCCTTGTTATAACTATGCAGCCAAAGACAGTGAAACTAGTACTGTGGAATGTGCAGTGTGCTTGGAGAATCAGATTCCCGGGGATAAGTGCAGATTATTGCCTGCATGCAAGCACAGTTTTCATGCCCACTGTTTGGATCAATGGCTTCTTCGGACACCCATTTGTCCTATTTGCAGGGCCAGTGTTGACTCTCAGAAGGAATGCTTTGCTATAGATATAAATGAGAGTGGCCATTTTGAGCCAAACAGGACACAGTTGAGAGAAAGCCCAGAAACTGGTTTTACAATGCAGTCCACAGAGAATTCAACGCCAGAAGGGTAG 381 0.4436 MESETTNEARSMSKDEIEKLPCYNYAAKDSETSTVECAVCLENQIPGDKCRLLPACKHSFHAHCLDQWLLRTPICPICRASVDSQKECFAIDINESGHFEPNRTQLRESPETGFTMQSTENSTPEG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2359g00004 126 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 9 101 - -
Pral2359g00004 126 ProSiteProfiles Zinc finger RING-type profile. 37 79 IPR001841 -
Pral2359g00004 126 SMART ring_2 37 78 IPR001841 -
Pral2359g00004 126 Pfam Ring finger domain 36 79 IPR001841 -
Pral2359g00004 126 MobiDBLite consensus disorder prediction 100 126 - -
Pral2359g00004 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Pral2359g00004 126 MobiDBLite consensus disorder prediction 106 126 - -
Pral2359g00004 126 SUPERFAMILY RING/U-box 17 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2359g00004 Pral-Chr2359 33853 34233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2359g00004 8 82 C3H Transcription Factor Family AT1G74410 42.667 5.03e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2359g00004 - K15692 lang:109353575 137.502