Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2358g00005 ATGGATAATGATAAATCCTCTATTTACGGTGGAGGTCTTCCGCCTTCGGGACGTTATTCAGGCTTCTCACCTCCGGGAAGCTCTTTCAACGTGAAACCAGAAGCATCCTCATCATCGTCATCTTTTCCGCCGCTGGTACCCGGTACCAGCTCGGACTCTAGTGGCTTCAGTCATGATATTAGCAGGATGCCTGATAATCCTCCTAGAAACAGGGGTCATAGACGGGCCCATTCTGAGATTCTCACCCTGCCGGATGATCTAAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCTTCCTTTTCTGATGAGACTGAGGAAGACTTGCTATCGATGTACCTTGATATGGATAAATTTAACTCTTCATCTGCGACATCTGCATTTCAAGTGGGTGAAGCTGCTGCATCAGTTCCAGCGCCAAAATTGGAACCAACAGCAGGAATTGTGGCCTCTCCTGTAGAGAATGCTGGTATTGATGCTAATGAAAGGCCCAGAGTTAGGCACCAACACAGCCAGTCCATGGATGGGTCGACATCCATTAAACCCGAGATCTTAGTATCAGGTTCTGAAGAAGGTTCTGCAGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCGGAACTTGCCTTAGTTGACCCAAAGCGTGCAAAAAGGATATGGGCAAACAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAGGTGCAGACCCTTCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCCTGCAGAGAGATACAAATGGGCTGAATGCTGAGAACAGTGAGCTGAAGCTCAGGTTGCAGACTATGGAACAGCAAGTTCACTTGCAAGATGCTTTAAATGACGCGTTGAAAGAGGAAATACAGCATTTGAAACTAGTGACGGGGCAGGCTATGATGAATGGTGGACCTGTGATGAACTTTGCTCCTTTTCGAGGAGGGCAGCAATTTTATCCCAACAATCACGCCATGCACACTCTCTTGGCAACACAACAGTTTCAACAACTCCAGATTCAGTCTCAGAAGCAGCAGCAGCTTCAGCAACATCAGCTGCATCAGCTTCAGCAGCAACAAACGGGGGACTTAAAAATGAGAACAACTACTCGTTCTCCAAGCCCCAAAGATCGAAATTCACCGGCAGCCAAGGATTGTTGA 1203 0.4755 MDNDKSSIYGGGLPPSGRYSGFSPPGSSFNVKPEASSSSSSFPPLVPGTSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDLSFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFNSSSATSAFQVGEAAASVPAPKLEPTAGIVASPVENAGIDANERPRVRHQHSQSMDGSTSIKPEILVSGSEEGSAADSKKAMSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLVTGQAMMNGGPVMNFAPFRGGQQFYPNNHAMHTLLATQQFQQLQIQSQKQQQLQQHQLHQLQQQQTGDLKMRTTTRSPSPKDRNSPAAKDC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2358g00005 400 MobiDBLite consensus disorder prediction 1 79 - -
Pral2358g00005 400 MobiDBLite consensus disorder prediction 365 400 - -
Pral2358g00005 400 Coils Coil 234 303 - -
Pral2358g00005 400 CDD bZIP_plant_RF2 219 268 IPR044759 GO:0003700|GO:0006355
Pral2358g00005 400 FunFam probable transcription factor PosF21 217 270 - -
Pral2358g00005 400 MobiDBLite consensus disorder prediction 64 79 - -
Pral2358g00005 400 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Pral2358g00005 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 279 IPR004827 GO:0003700|GO:0006355
Pral2358g00005 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 22 377 - -
Pral2358g00005 400 MobiDBLite consensus disorder prediction 365 391 - -
Pral2358g00005 400 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Pral2358g00005 400 Gene3D - 217 290 - -
Pral2358g00005 400 MobiDBLite consensus disorder prediction 21 60 - -
Pral2358g00005 400 Pfam bZIP transcription factor 218 274 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2358g00005 Pral-Chr2358 12285 15953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2358g00005 18 345 bZIP Transcription Factor Family AT1G06070 73.030 2.64e-167 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral2358g00005 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2358g00005 - - pcin:129313665 662.914