Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2355g00002 ATGGCGTCTTCTGTCAACGGAGTTGCGCCTTTATCAGAGGTTCAGAATTCAGTTTCTGCGATAGATTCCGATCCTCCTTCAACATTTTGGATTCCTCGGCCGTCCCGGCCTCCTCTAAGAACTTCCAGAAATCACGGGGTTTCTTCTGCATCCTATTTTACTGGCCATGATGACTATGCAACGATGCCCATCAACCGTCATAGAAGCTGTGTAATTAATCGAAGGCATTCTTATCTAGAGCCCAACATTGTGCAGCACGGAGAGTTACCAAATGCGTCAGAGCTGTATTACAACTATGGTGGAGAATCTGGCTGTTTAAGCCTCCCTGAAACTGGAGAAAGTTGTTTCGGGAAGAACATCTGTACCATTGAACCATTCGATACTTCCACCAATTGTGATTCAAGTAGCAGCGTATTAGAATTTGTAGGTCCATCAAGAGGGGTTGATTCAGTCAAGAGTTACTGTCATCCAGGGGTTACTTTTTGTCCAAGTCCTCAGACTAGCTTCTATTCTGCCACTTTCTATTCCGAAGCCAAGCAAAGTTTTTCTAATACTGAAATCAGTGAAGGTGTTAGTGTTGATAAGTCAAGTGAGATTGGTGGAGTTACTAACTCCTATTATTGTAACGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTAGTGTGAGTGAAGTTAGTGATGAGAGCAGCAACTGTACTTCAAACAGCTCTTTGTATAGACCCCACAAGGCAAACGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGCACGCGATGTGATCTTGGAAATGAGACATTTCAGGGTGTTGAAGACATTGGGACGTGGAGACATAGGAAAAGTTCATCTTGTGGAGTTGACTGGCACAGGAACTTATTTTGCCATGAAAATTATGAATAAAGAAGAGCTAGCAAGTCGCAAGAAGCTTCTGAGGGTTCAGACAGAGAGAGAGATATTGCAGTCTTTGGATCATCCATTTCTGCCCACATTATATGCGCACTTTGAGACAGAGATATTCTCTTGCTTGGTAATGGAGTTCTGCCCCGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCCGGGAAATATTTCTCAGAGCATGCTGCCAGGTTCTACGTGGCAGAGGTTCTTCTTGCTTTGGAGTACTTGCACATGATGGGGATCATCTACCGAGACCTTAAACCTGAGAATGTCTTGGTGAGAGAAGATGGTCACATAATGCTGTCAGATTTCGACCTCTCTCTGAGGTGCACTGTCAGTCCAACTCTAGTAAGATCATCATACTCTTGCATGGAGACAAAAGCCTCAAGACACTGTGCTCCACCTGCGTGCATTCAACCAACATGTGTCATGCAGCCAGATTGCATCAGACCTGCATGTTTCACACCTAGAGTCCGATCTGGAAAGCCCAAGAAAGACAAGAAGTTGAAAACCAGAAATGAAATGCATCATCCAGTGGCCTCTCTTCCTGAGCTCATTGCAGAGCCAACAAATGCACGTTCAATGTCATTCGTGGGCACTCATGAGTACTTGGCTCCAGAGATTATCAAAGGAGAAGGGCATGGCAGTGCTGTAGACTGGTGGACCTTTGGGATATTCTTATATGAGCTTCTGTTTGGTAGAACGCCGTTCAAAGGTTCAGCAACTAGAGCAACTCTGCTCAATGTGGTGGGTCAGCCCTTGAGATTCCCAGAATCACCTAGTGTCAGCTTTGCTGCTAGAGACCTGATAAGAGGCTTGCTTGTGAAAGAGCCACAGCATCGTCTTGCTTATAGACGTGGAGCTACTGAAATCAAACAACATCCATTCTTTCACAATGTTAACTGGGCACTCATTCGCTGCACTCATCCTCCGGCGGTCCCCAGACAGGCCATGAAAGCTCTCACAGTTGAAAAGATGGCTGACACTGCTTTGAAGCATTCTTCTGGTAAATATTTAAATGTTGATTACTTTTGA 1956 0.453 MASSVNGVAPLSEVQNSVSAIDSDPPSTFWIPRPSRPPLRTSRNHGVSSASYFTGHDDYATMPINRHRSCVINRRHSYLEPNIVQHGELPNASELYYNYGGESGCLSLPETGESCFGKNICTIEPFDTSTNCDSSSSVLEFVGPSRGVDSVKSYCHPGVTFCPSPQTSFYSATFYSEAKQSFSNTEISEGVSVDKSSEIGGVTNSYYCNESRKTSICRGSSVSEVSDESSNCTSNSSLYRPHKANDVRWEAIQAIRARDVILEMRHFRVLKTLGRGDIGKVHLVELTGTGTYFAMKIMNKEELASRKKLLRVQTEREILQSLDHPFLPTLYAHFETEIFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVRSSYSCMETKASRHCAPPACIQPTCVMQPDCIRPACFTPRVRSGKPKKDKKLKTRNEMHHPVASLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSATRATLLNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCTHPPAVPRQAMKALTVEKMADTALKHSSGKYLNVDYF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2355g00002 651 Gene3D Transferase(Phosphotransferase) domain 1 499 622 - -
Pral2355g00002 651 SUPERFAMILY Protein kinase-like (PK-like) 241 632 IPR011009 -
Pral2355g00002 651 Gene3D Transferase(Phosphotransferase) domain 1 351 420 - -
Pral2355g00002 651 MobiDBLite consensus disorder prediction 17 47 - -
Pral2355g00002 651 FunFam serine/threonine-protein kinase D6PK-like 499 622 - -
Pral2355g00002 651 Gene3D Phosphorylase Kinase; domain 1 265 350 - -
Pral2355g00002 651 FunFam serine/threonine-protein kinase D6PK-like 351 418 - -
Pral2355g00002 651 PANTHER FLIPPASE KINASE 1-RELATED 185 627 - -
Pral2355g00002 651 ProSiteProfiles Protein kinase domain profile. 267 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2355g00002 651 SMART serkin_6 267 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2355g00002 651 CDD STKc_phototropin_like 265 624 - -
Pral2355g00002 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Pral2355g00002 651 Pfam Protein kinase domain 501 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2355g00002 651 Pfam Protein kinase domain 268 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2355g00002 651 FunFam Serine/Threonine Kinase 265 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2355g00002 Pral-Chr2355 3022 7000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2355g00002 175 648 AGC Kinase Gene Family AT5G47750 66.528 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral2355g00002 Pkinase 6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2355g00002 K08286 - gmx:100802402 875.159