Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2353g00001 ATGGCAGGTGGAACCGAAGCCTTCCCGGATTTGGGATCACACTGCCATCACGTTGATTGCAATCAACTCGATTTTCTCCCTTTCACATGCGACGCTTGCTCTCAGGTTTTCTGTTTGGAACATAGATCTTACAAGTCCCACAATTGCCCTAAATCACACCATCGGAGCAGGAAGGTTGTGGTTTGTCCAACATGTTCCATGTCAATTGAGACCACTGGTTATAATGAAGACGACGAGAAGGCTATATTGCAGAAGCATGACAGATCTGGAATGTGTGACCCCAGCAAGAAGAAGAAGCCCACTTGTTCTGTAAGAAGATGCAAGGAGGTTTTGACGTTTTCTAATACCTGCACTTGTAAAAATTGCCACCTGAAGGTGTGCCTCAGGCATCGCTTTCCTGCGGACCACGCATGTAAAGGAGGAACCTCTTCTTCTTTGTCATCACCTGAAGCTCCTTCAAATGGGAGTTGGAAGGATCGATTCTTGGCTGCTCTGCCTTGGAGAACTAATGGACAGCAATGTTCCCAAGGCAGGGCACAAAGCACCTCATCTTCTAGTACTCCGTTTGTTAAAATCTTCTGA 582 0.4656 MAGGTEAFPDLGSHCHHVDCNQLDFLPFTCDACSQVFCLEHRSYKSHNCPKSHHRSRKVVVCPTCSMSIETTGYNEDDEKAILQKHDRSGMCDPSKKKKPTCSVRRCKEVLTFSNTCTCKNCHLKVCLRHRFPADHACKGGTSSSLSSPEAPSNGSWKDRFLAALPWRTNGQQCSQGRAQSTSSSSTPFVKIF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2353g00001 193 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Pral2353g00001 193 SUPERFAMILY AN1-like Zinc finger 87 140 IPR035896 -
Pral2353g00001 193 MobiDBLite consensus disorder prediction 171 193 - -
Pral2353g00001 193 SUPERFAMILY AN1-like Zinc finger 5 60 IPR035896 -
Pral2353g00001 193 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Pral2353g00001 193 Gene3D - 78 154 IPR035896 -
Pral2353g00001 193 Gene3D - 2 66 IPR035896 -
Pral2353g00001 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 184 - -
Pral2353g00001 193 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Pral2353g00001 193 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Pral2353g00001 193 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Pral2353g00001 193 Pfam AN1-like Zinc finger 15 53 IPR000058 GO:0008270
Pral2353g00001 193 FunFam AN1-type zinc finger protein 2B isoform X1 5 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2353g00001 Pral-Chr2353 6085 6906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2353g00001 2 168 C2H2 Transcription Factor Family AT3G28210 61.078 1.19e-72 216