Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2352g00007 ATGAAGATTCCTCGTTCATTTCTCGCCTGTTTCTCGGCAACAGTCAAAGACCCAAGACAGCTAGATGACCCGGAAGGAAGCACTGGGAAAGCATTTCGTGTATTCTCTCGCAGCGAATTGAAATTGGCCACTCGTGGTTTCAATTCCTGGGACAAGATTGGACAAGGGGGATTCGGTTCTGTTTACAAGGGGCAACTTAGGAACGGCAATGTAGTGGCCGTGAAAGTGCTTTCAATCGAACTGGAATCCATGCGAGGAGAAACTGAGTTCGTGGCAGAATTGGCCACAATGTCTCGTATCAAGCACGAAAATTTAGTTAGTCTTCAAGGTTGTTGCGTCGAAGAAGCCCGACGATATTTAGTCTTCGATTACATGGAAAACAATAGCCTGTCCCGCACTTTTGCAGGCACAGAGGAAAGCAGGATGAAATTCAGATGGGAATTGAGGAGGAACATATCTATAGGCGTGGCTCGTGGCCTTGCCTATCTCCATGAGCAACTAAAACCCCACATTGTCCACAGAGATATCAAACCCAGCAACATCCTTCTCGATCAAGACTTCACACCCAAACTATCTGACTTCGGTTTCGCAAAGTTATTTATGGACGGCGAGTCCTACGTCAGTACTAGAGTCGCAGGGACATTAGGCTATCTTGCTCCGGAGTATGCCACTACTGGAAAGTTGACGCGAAAGTCGGATGTTTATAGCTTTGGAGTATTACTCTTACAAATTGTTAGCGGCCAACCGGCAGTTGATGCTTATCAGGACATGGATCGTTTCCTAGTAGAGAAGGTGTGGGCGGCTTATAAAGCCGAAGAGCTAGCAAAAATGGTGGATCCTATGATTACAAATGTGAACTTGGTAGCGGAAGAAGTAGTTCGATTCCTAAAAGTGGGGCTGCTTTGCGTGCAAGAAATCGCCAGGCTTCGGCCACGAATGACAGAGGCCGTTGAAATGTTGAGCGGCAGCTATAATATTAATGACATGGAAGGTGTTCCTATTTCAAAACCAGGCTTTGTTGCTGATCTCAGAAACATCAAAATAAGGCAGCAAATGCCTGTAACTGTAAGTCCCGAATCCATTTCCAGTGGAGCCAACCAGGATATTTGGAGTTCCGTCATTGTCGCCCGTTAA 1134 0.463 MKIPRSFLACFSATVKDPRQLDDPEGSTGKAFRVFSRSELKLATRGFNSWDKIGQGGFGSVYKGQLRNGNVVAVKVLSIELESMRGETEFVAELATMSRIKHENLVSLQGCCVEEARRYLVFDYMENNSLSRTFAGTEESRMKFRWELRRNISIGVARGLAYLHEQLKPHIVHRDIKPSNILLDQDFTPKLSDFGFAKLFMDGESYVSTRVAGTLGYLAPEYATTGKLTRKSDVYSFGVLLLQIVSGQPAVDAYQDMDRFLVEKVWAAYKAEELAKMVDPMITNVNLVAEEVVRFLKVGLLCVQEIARLRPRMTEAVEMLSGSYNINDMEGVPISKPGFVADLRNIKIRQQMPVTVSPESISSGANQDIWSSVIVAR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2352g00007 377 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 21 124 - -
Pral2352g00007 377 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2352g00007 377 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Pral2352g00007 377 SMART serkin_6 47 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2352g00007 377 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pral2352g00007 377 SUPERFAMILY Protein kinase-like (PK-like) 31 320 IPR011009 -
Pral2352g00007 377 Gene3D Phosphorylase Kinase; domain 1 19 124 - -
Pral2352g00007 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral2352g00007 377 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2352g00007 377 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 125 324 - -
Pral2352g00007 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 357 - -
Pral2352g00007 377 CDD STKc_IRAK 53 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2352g00007 Pral-Chr2352 33587 35489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2352g00007 34 342 Receptor kinase-like Gene Family AT1G56120 46.452 7.87e-87 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2352g00007 Pkinase 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2352g00007 - - gmx:100813945 459.914