Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2351g00017 | ATGATGAACGAGGGTTCATTTGGGAATGGGAACGCTCATACGGCGTCGCATAACTTGGCCGACATCTGGCAGTTCCCGACGAACGGCGGTGCTGGTCTCGGGGAGTCCAGGGGAGGGTTGGGCTTGAGGAGGCCGCAGTTCGGACAAAATTTGGGGCAGTTTGGGGCGTTTACATCGGGTTCGAATCCGAATGGCCCGGGTATTGACCCGAGCTGTTCGGACCAGGAAGGAAACGGGGTCAATAGGAAGAAGCGCGACTCCGAGGATGAATTGGCGAAAGGCGTCTCTACCACCAGCAACGGTGGCATTGGCGATAGCAATGGCGTGAATGATGGTGATGGAAAACGGCTTAAAGTATGTGGAAATCGGAATGAGAGCCTTGAAACGAAAGCTGAAACAGAAACCGGCTCAGAAAAGCCAGCGGAGCAAAGTACTCAGCCAGCTTCTGAGCCTCCTAAGCCGGCTTACATCCATGTACGGGCGAGAAGGGGTCAAGCTACTGATAGTCACAGTCTAGCGGAAAGAGCGAGGAGGGAAAAGATAAGCGAGAGGATGCAAATTCTTCAGGAGTTGGTTCCTGGTTGTGACAAGGTTACTGGGAAAGCGTTGGTCCTCGATGAGATAATAAATTACATTCAGTCGCTACAGCGCCAAGTTGAGTTCTTGTCAATGAAGCTTGAAGCTGTAAATTCAAGTGTGAACCCTGCTGGCATTGAAATTTTTCATCCAAAAGATAGAAAGTCTGAAATTGAGGAGGGCGTGAATATGGACAGGGAGAATCAGGAAAGGGTTTTGATTTCCACTTGA | 807 | 0.5043 | MMNEGSFGNGNAHTASHNLADIWQFPTNGGAGLGESRGGLGLRRPQFGQNLGQFGAFTSGSNPNGPGIDPSCSDQEGNGVNRKKRDSEDELAKGVSTTSNGGIGDSNGVNDGDGKRLKVCGNRNESLETKAETETGSEKPAEQSTQPASEPPKPAYIHVRARRGQATDSHSLAERARREKISERMQILQELVPGCDKVTGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSSVNPAGIEIFHPKDRKSEIEEGVNMDRENQERVLIST | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2351g00017 | 268 | CDD | bHLH_AtBPE_like | 156 | 235 | - | - | |
Pral2351g00017 | 268 | Pfam | Helix-loop-helix DNA-binding domain | 169 | 216 | IPR011598 | GO:0046983 | |
Pral2351g00017 | 268 | MobiDBLite | consensus disorder prediction | 26 | 153 | - | - | |
Pral2351g00017 | 268 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 163 | 233 | IPR036638 | GO:0046983 | |
Pral2351g00017 | 268 | SMART | finulus | 171 | 221 | IPR011598 | GO:0046983 | |
Pral2351g00017 | 268 | Gene3D | - | 162 | 236 | IPR036638 | GO:0046983 | |
Pral2351g00017 | 268 | MobiDBLite | consensus disorder prediction | 78 | 92 | - | - | |
Pral2351g00017 | 268 | MobiDBLite | consensus disorder prediction | 51 | 77 | - | - | |
Pral2351g00017 | 268 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 74 | 249 | IPR024097 | GO:0006355 | |
Pral2351g00017 | 268 | Coils | Coil | 212 | 232 | - | - | |
Pral2351g00017 | 268 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 165 | 215 | IPR011598 | GO:0046983 | |
Pral2351g00017 | 268 | MobiDBLite | consensus disorder prediction | 116 | 137 | - | - | |
Pral2351g00017 | 268 | FunFam | Basic helix-loop-helix transcription factor | 162 | 234 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2351g00017 | Pral-Chr2351 | 89856 | 93521 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2351g00017 | 1 | 245 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G59640 | 53.600 | 1.63e-64 | 203 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pral2351g00017 | HLH | 6.1e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2351g00017 | - | - | qsa:O6P43_025379 | 296.589 |