Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2348g00001 ATGGCCGATGACTTTGATTTTTCTGATCAAGTTCCTCCTTCTTTCGATCGCGTGGGAGATGTGATTAAGAATTCTGAAGCCAAAGGATTCAATCCAGGGTTAATAGTTCTCCTGGTTGTTGGAGGGCTGCTATTGACATTCCTCATTGGAAATTATGCCCTTTACCTGTATGCGCAGAGAACCCTTCCTCCTCGAAAAAAGAAGCCAGTCTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCGTTTCTGCACCTGGAGAGTAG 270 0.4519 MADDFDFSDQVPPSFDRVGDVIKNSEAKGFNPGLIVLLVVGGLLLTFLIGNYALYLYAQRTLPPRKKKPVSKKKMKRERLKQGVSAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2348g00001 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral2348g00001 89 MobiDBLite consensus disorder prediction 65 79 - -
Pral2348g00001 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral2348g00001 89 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2348g00001 Pral-Chr2348 11446 13397 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pral2348g00001 S1FA 4.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2348g00001 - - gmx:100499820 144.821