Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2347g00001 ATGATGGGTTGCGTTTGTTGCAAGCCCTCAGCCATTGACGACAGTAGGGAGAGTCCAAGGGAGCGATTATCAAATAAGGCTTCGTTGGACTCCCGTGGATCTAGGGCCACTTCGTCAAGGAGAGAGGATGGATATCGAGTGAAGGATAGATGCGATAGTACTGATGGTCGAACTGCATCCATGGATAAACAAGGAAATGGCTCTGTGCGTTTACAAGTTGATCATTTTGAAAGGAAGAGGGAGAAACCAGAGTATGTTATTGCACAGCATCCAGGAATTGGTAGCGTTCCAAAAGCCACAGAAGGGGAGCAGGTTGCAGCTGGGTGGCCTTCATGGTTGGCAGCGGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGACGAGCAGATTCTTTTGAGAAGTTGGATAAAATTGGTCAGGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTTGAGCATAAGAAAATTGTTGCTTTGAAAAAAGTGAGGTTCGATAATCTTGAACCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAATGTTATAAAACTGGAAGGTCTAGTTACATCAAGGATGTCTTGCAGCCTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGACTAAAGTTTACTGAAGCGCAGGTCAAATGTTATATGCAGCAACTTCTACGTGGACTTGATCACTGCCATAGCTGTGGTGTACTGCACCGTGACATTAAGGGATCCAACCTTCTGATTGACAACAATGGAATCTTGAAGATTGCAGACTTTGGTTTGGCAAGCTTTTATAATCCCAATCAAATTCAGCCATTGACTAGTCGAGTTGTCACGCTCTGGTATCGTCCTCCAGAGCTTTTGCTTGGAGCAACTTACTATGGCGCTGCAGTTGATTTATGGAGTACAGGCTGCATACTTGCTGAGCTGTATGCTGGAAAGCCTATTATGCCAGGAAGAACTGAGGTGTGCATACTTAATTTTCACCATCTAATTTGA 1047 0.4479 MMGCVCCKPSAIDDSRESPRERLSNKASLDSRGSRATSSRREDGYRVKDRCDSTDGRTASMDKQGNGSVRLQVDHFERKREKPEYVIAQHPGIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEHKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFYNPNQIQPLTSRVVTLWYRPPELLLGATYYGAAVDLWSTGCILAELYAGKPIMPGRTEVCILNFHHLI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2347g00001 348 SUPERFAMILY Protein kinase-like (PK-like) 126 345 IPR011009 -
Pral2347g00001 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pral2347g00001 348 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Pral2347g00001 348 MobiDBLite consensus disorder prediction 13 28 - -
Pral2347g00001 348 SMART serkin_6 132 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2347g00001 348 MobiDBLite consensus disorder prediction 9 65 - -
Pral2347g00001 348 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Pral2347g00001 348 Pfam Protein kinase domain 132 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2347g00001 348 PANTHER CELL DIVISION PROTEIN KINASE 130 340 - -
Pral2347g00001 348 FunFam Mitogen-activated protein kinase 213 348 - -
Pral2347g00001 348 Gene3D Transferase(Phosphotransferase) domain 1 215 347 - -
Pral2347g00001 348 ProSiteProfiles Protein kinase domain profile. 132 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2347g00001 348 MobiDBLite consensus disorder prediction 35 57 - -
Pral2347g00001 348 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2347g00001 Pral-Chr2347 1703 4459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2347g00001 124 343 Core Cell Cycle Gene Families AT5G10270 56.596 1.58e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral2347g00001 Pkinase 3.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2347g00001 - - gmx:100792173 627.476