Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2341g00001 ATGGTACCCAGATTCGGATTTCCGTTTCTCTTCTTACTGTTATTCTCTCTCTGTCTCAATGCAGAATCCAAGTGTAAGAAAGGATGTGGCTTGGCTCTTGCCTCCTACTACATTTGGGTCGGTTTTACCAGTAGGGTCGGTTTTACCAATATCACGGCCCTTCCGCCGATCATGCAATCCCCAGTTCTTCGAACAACACAAGATATCATCAGCTATAACACAGACCAATTATTAAGCGACGACTATGTCAATACCACCGCTCGAGTGAACATTCCGTTCCCTTGCGATTGCATAGATGGTGAATATCTGGGGTACGTATTCAAGTACCCGATTCAGAAAGGAGACACCTATGCGTTGGTTGCGAATCAGAGCTATGCCAATTTGACCACCGTTTTGATGTTGGAGAGTGCGAATAGCTATTCACCGGACAATATTCCTGACCATGGAACGCTCAATGTGACGGTGAACTGTTCGTGTGGGGATCGCCGCGTTTCGAAAGAGTACGGGTTGTTCATCACGTACCCACTTAGAGCCGAGGATTCTCTGGAATCAATTGCGAACCAGACGAAGCTTGATGAGGATTTGTTGCGCAGGTATAATCCTGGTGTCGATTTCAGCAAAGGAAGTGGTGTGGTGTATATCCCGGGAAAAGGCCAAAATGGTGTCTTTGTGCCGCTGCCCCCTAGCAGAAGAGGTCTAAGTGGTGGGGCTATTGCTGGATTATCTGCTGGAGCAGTAGCTGGGTTTCTCTTATTGGCTGTTTATATGTATGTTGCATATTACCGTAAGAAGGAGGAGGGGGCAAAACTGCTTTCTGGAGAATTAGTAGTCTTCTCTGCTCAAACAAGGAACGATTCCAATGGTCCTCCTGCTGCTGTTAATACTGGCATCAAAGGTATTACTGTGGAGAAGTCAGTGGAGTTTTCATATGAAGAATTAGCTCGAGGGACAAACAACTTCAGCATGGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTCTACTATGCGGAGCTGAGAGGCGAGAGAGCTGCAGTTAAAAAGATGAAGTCACAAAATGCAGAAGAGTTTCTTGCTGAATTGAAAGTGTTAACACGTGTTCATCACCTGAACCTGGTACGCTTGATCGGATATTGTGTTCAGAAGAATTGTCTTTTCCTGGTATATGAATATATTGACAATGGGAACTTAAAAGAGCACTTACGTGATCCAGGGAGAGAACCATTGCCGTGGTCACTACGAGTGCGAATTGCTCTGGATTCAGCCAGGGCTCTTGAATACATTCATGAGCATACAGTGCCTGTATATATTCATCGTGATATAAAGCCAGCTAATATATTGATAGATCAAAACTTCCGTGCAAAGGTTGCAGATTTTGGGTTAACCAAGCTCATTGAAGTGGGAAGTTCATCTCATCTCTCTAAAGGGCTTGCAGGCACATTCGGTTATATACCACTCCAGAATGATGGTACTGTTAAAACCGATGTCTATGCTTTCGGAGTTGTTCTCTGCGAACTTATATCTGCTCAAGCAGCTGTGCTCAGTGTCGGTGAAGTTGGTTCTGAAGCGAGAACCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGCAGCCTAATCCTGAAGAACATCTTCTAAAGCTTGTTGATCCTAGGCTTGAAGACCAATATACATTCGATTCTGTTTACAAGATGGTCCAACTAGCCAAGGCATGCACAGAGAAAAAACCAGACCGACGTCCAAGAATGAGATCTGTTGTGGTGGCTCTAATGGCACTCTCTTCTGCTTCTGTGAAATGGGATGTTGCCTCCTTGTATGAAAATCCGATACCCAAATTTGATGCAGCGGAAACAGAGAGCATAAGTGAATAG 1866 0.4469 MVPRFGFPFLFLLLFSLCLNAESKCKKGCGLALASYYIWVGFTSRVGFTNITALPPIMQSPVLRTTQDIISYNTDQLLSDDYVNTTARVNIPFPCDCIDGEYLGYVFKYPIQKGDTYALVANQSYANLTTVLMLESANSYSPDNIPDHGTLNVTVNCSCGDRRVSKEYGLFITYPLRAEDSLESIANQTKLDEDLLRRYNPGVDFSKGSGVVYIPGKGQNGVFVPLPPSRRGLSGGAIAGLSAGAVAGFLLLAVYMYVAYYRKKEEGAKLLSGELVVFSAQTRNDSNGPPAAVNTGIKGITVEKSVEFSYEELARGTNNFSMANKIGQGGFGAVYYAELRGERAAVKKMKSQNAEEFLAELKVLTRVHHLNLVRLIGYCVQKNCLFLVYEYIDNGNLKEHLRDPGREPLPWSLRVRIALDSARALEYIHEHTVPVYIHRDIKPANILIDQNFRAKVADFGLTKLIEVGSSSHLSKGLAGTFGYIPLQNDGTVKTDVYAFGVVLCELISAQAAVLSVGEVGSEARTLVSLFEEALEQPNPEEHLLKLVDPRLEDQYTFDSVYKMVQLAKACTEKKPDRRPRMRSVVVALMALSSASVKWDVASLYENPIPKFDAAETESISE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2341g00001 621 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pral2341g00001 621 SMART serkin_6 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2341g00001 621 FunFam PTI1-like tyrosine-protein kinase 3 392 602 - -
Pral2341g00001 621 FunFam LysM receptor kinase 2 299 391 - -
Pral2341g00001 621 SUPERFAMILY Protein kinase-like (PK-like) 301 588 IPR011009 -
Pral2341g00001 621 ProSiteProfiles Protein kinase domain profile. 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2341g00001 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 601 IPR044812 GO:0019199|GO:0045087
Pral2341g00001 621 Gene3D Phosphorylase Kinase; domain 1 294 391 - -
Pral2341g00001 621 Gene3D Transferase(Phosphotransferase) domain 1 392 603 - -
Pral2341g00001 621 Pfam Protein tyrosine and serine/threonine kinase 322 587 IPR001245 GO:0004672|GO:0006468
Pral2341g00001 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2341g00001 Pral-Chr2341 5129 16788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2341g00001 12 603 Receptor kinase-like Gene Family AT3G21630 53.388 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral2341g00001 PK_Tyr_Ser-Thr 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2341g00001 - K13429 gmx:100803042 673.315