Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00045 ATGGGTGGTGAACCAAGGAAGAAACCGAAGCCCGCGCAGCTGAATCCCAACTGGACTCAACTCCAACAAAAGCTCAAAATTCGTGCCTCTGATGCTTCAAGACCCTTCAAAAACTCAGAAACTGAGGCCCCAAACTCAGTACTGGGGAAGCGGAAAGAGAGGGAAGATGCAGAGTCCAGTGATTCTCAGATTAATCCTCTTACCCCTGTAAATGATGATTCCAGTCTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACCCTGGTTAATAGGTGGGGAAATGTTATTTATGATGAATTTGTTAGACCAGTGGAGCGCGTTGTTGACTTCCGCACCAAAATTAGTGGCATAAGATCTCGGGACTTAAGAAAAGCAAAGGATTTTTGGGCGGTTCAGAAGAAAGTGGCAGAGTTAATCAAAGGCAGGGTCCTTGTGGGACATGCCCTGCACAATGATCTTAAGGCGTTATTATTAAGTCATCCCAAGAAGGATATTCGAGATACCTCTGAGTACCAACCATTTCTAAAGTGCGGTTTTACTGATCTAACTCTGCCTGCCTATCACGTAGCAGAAGAGCACTTCGACATCTTGCTGCTGAACTTCTGGGTGCTAAGATCCAATCTGGGGAGCACTGTCCTATAG 684 0.4605 MGGEPRKKPKPAQLNPNWTQLQQKLKIRASDASRPFKNSETEAPNSVLGKRKEREDAESSDSQINPLTPVNDDSSLTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNVIYDEFVRPVERVVDFRTKISGIRSRDLRKAKDFWAVQKKVAELIKGRVLVGHALHNDLKALLLSHPKKDIRDTSEYQPFLKCGFTDLTLPAYHVAEEHFDILLLNFWVLRSNLGSTVL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00045 227 SUPERFAMILY Ribonuclease H-like 79 184 IPR012337 -
Pral2335g00045 227 CDD REX4_like 80 190 IPR037431 GO:0006364|GO:0008408
Pral2335g00045 227 MobiDBLite consensus disorder prediction 13 27 - -
Pral2335g00045 227 Gene3D - 74 202 IPR036397 GO:0003676
Pral2335g00045 227 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 32 189 IPR047021 GO:0004527
Pral2335g00045 227 Pfam Exonuclease 80 164 IPR013520 -
Pral2335g00045 227 MobiDBLite consensus disorder prediction 46 60 - -
Pral2335g00045 227 SMART exoiiiendus 78 224 IPR013520 -
Pral2335g00045 227 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00045 Pral-Chr2335 239709 243994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00045 80 190 C2H2 Transcription Factor Family AT3G27970 36.508 9.31e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2335g00045 K18327 - gmx:100819122 314.309